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GT16701

CSHL Arabidopsis genetrap mutant lines

Original: GT16701

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16701

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7916794 [Map]; Strand: w
      • AT1G22420.1 - [+] show detail - hydroxyproline-rich glycoprotein family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16701 - 5-prime edge 
    CCTACTTTCT CCGTGGACCG TTCAGAGATT CTGGCAACTG CCAATATAAA 
    GATTCGTCCG GTGAAGTCAC CTGAACTGGT GGAGGAATGC CCTCGGATAG 
    TAGATCGGTC ATAGAATTGG CCCAATCTAA TGATCCGGAC GGTAAAGTCG 
    TCGGAAGTGG TGGTTGTTGA ATGTTCTCCG TTTGTAGATT ATCAGGAGAC 
    ATAAGCCACT CAAAAAAACC GAACGGTGCA CTTGTCGGAA CTGGTGGTGG 
    TGTAATGTTC GCTGGAACTG GTGGTGGTGT AATGTTCGCT GGAACTGGTG 
    GAGGAGGAAT GCTCTCTTGT TGTTGGCACT CATCACCATT TACGAACAGG 
    GGAGGCAACA TAGACCCATG TAACTGTTCC TGGTTCATAT CGTCTTCCAT 
    CACTCGCGCT TCCACCGAAT CTTTCTCTCG AGGAAGAGAC GGTGGAGACG 
    GAGGTCGAGT GTTGAGTGAT TCAACCGTTG AGGTGATCAT GGGATCGGTC 
    ATAGTCGGGA CCGTAGGAAA TCGATAAGGA CGTTGTGTAG TAATACGAGA 
    GGCACTTGGT GGGCTATTGT TAACAACGAA TGGCGGAGGA CGTACATTGT 
    CGAAACGACG ACCACAGGTT GAGCCGGTGA GGCGATGAAC CATCTCCTTA 
    AAATGGTGTT TGTGGATTTT CAAGATCACC GGCTCTTTAG CTTTTCATTT 
    TGATCTCTCA GAGGAAACAT TGTTAGTTTG GTTTGGATCA AGATCCATTG 
    AGAAACTTTG AGGTAAATTG GTAATTTTCC GG

AT1G22420.1

Model type
Protein coding
Short Description
hydroxyproline-rich glycoprotein family protein
Computational Description
hydroxyproline-rich glycoprotein family protein; Has 5656 Blast hits to 3947 proteins in 438 species: Archae - 16; Bacteria - 438; Metazoa - 2628; Fungi - 766; Plants - 800; Viruses - 196; Other Eukaryotes - 812 (source: NCBI BLink).
Link
InterPro Scan - TAIR