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GT16725

CSHL Arabidopsis genetrap mutant lines

Original: GT16725

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT16725

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2755263 [Map]; Strand: w
      • AT3G09030.1 - [+] show detail - BTB/POZ domain-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16725 - 5-prime edge 
    CGGCTGCTAT ATGGAGTCCC GTCTGCTTTA ACCGCTACTG CTGGAGACGC 
    CTCTCTGTGG ATCGCTCACG GTGGTCAGAT CTCCGTCTAC GATTGGAGTC 
    TTTCCCATGG TGGAACCGTC GGTACCCATC TTAACTATAT CACATCGATC 
    TGCCGTGACT GGGGCGAAGC TGCTGCCACT GGATCTGGAT CCGCGTACGG 
    GACGTCATTT CTACGAGCTC TCTGGAGGTC GATACATCCT ATC

AT3G09030.1

Model type
Protein coding
Short Description
BTB/POZ domain-containing protein
Computational Description
BTB/POZ domain-containing protein; FUNCTIONS IN: voltage-gated potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: voltage-gated potassium channel complex, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ fold (InterPro:IPR011333), Potassium channel, voltage dependent, Kv, tetramerisation (InterPro:IPR003131), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain with WD40/YVTN repeat-like protein (TAIR:AT5G41330.1); Has 1593 Blast hits to 1581 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 1335; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).
Link
InterPro Scan - TAIR