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GT16726

CSHL Arabidopsis genetrap mutant lines

Original: GT16726

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16726

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 11184794 [Map]; Strand: c
      • AT5G29550.1 - [+] show detail - transposable element gene
        Distance: -280; Region: promoter
    Flanking Genome Sequence: GT16726 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAC 
    TACCCGACGG GATCGTATCG GCATATTCGT CTCACATCAC AACAGAACTC 
    CGCAGTCAAA CGTGCTTGGG CGAGAGTAGT ACTAGGATGG GTGACCTCCC 
    GGGAAGTCCT CGTGTTGCAT CCCTCTCTTA TGTTTAACCT TTTTTGTTTT 
    GGTTAAAACT TTATGACTCC ATAACTTTTA GACCGTGAGG CCAAACTTGG 
    CATGTGATAC CTTTTCGGAA AGCCCAAAGA CAGCCCTCCG ACGAAAGAAG 
    CAGGACAATG GAACTTTTCC ATTGACTTTT TGTCGACCCC AAATTTTGAC 
    CTTTAAGTAC TTTTTCGGGC ATTTTCGTGA TTTGGGCTAT ATTACGGACC 
    CAAAATTACT TGTTCAAGCA TTGTTTTCGA ATTTTTTCAT GCATCAAAGC 
    TCGTTAAGAC TAGATGGGGT ATCCCTACAT AGCGGATGGG ACCCACGGCG 
    AATGGTTCAT CAAGTCTTCA AAAAAGAATA TATACGATTG CATTGCATAT 
    ACTACCCGAC CGGATCGTAT CGGT

AT5G29550.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 7.4e-126 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR