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GT16729

CSHL Arabidopsis genetrap mutant lines

Original: GT16729

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16729

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5994841 [Map]; Strand: w
      • AT3G17510.2 - [+] show detail - CBL-interacting protein kinase 1
        Distance: -3560; Region: intergenic
      • AT3G17520.1 - [+] show detail - Late embryogenesis abundant protein (LEA) family protein
        Distance: 4448; Region: intergenic
    Flanking Genome Sequence: GT16729 - 3-prime edge 
    ACCGACCGTT ACCGACGTTT TCATCCTATA TACACATTCT ACCCGACCGG 
    ATCGTATCGG TTTATCGATT ACCGTATTTA TCCCGTTCGT TTTCGTTACC 
    GGTATATCCC GTTTTCGTTT CCGTCCCGCA AGTTAAATAT GAAAATGAAA 
    ACGGTAGAGG TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTATATA 
    CACATTCTAC CCGACCGGAT CGTATCGGTT TACGATTACC GAATTACTCC 
    CGTATCGTTT TCGATACCGG TATATCCCGT TTCCGTTCCC GTCCCGCAAG 
    TAAAAAGAGA GAGAGAGGTT CTGATAACAT AGATCAATCA ATATGTTACT 
    CACTGCCGGC AGCAATACTA TCACCGGCCA TTTTGACACG TTTGAGAGAC 
    TCGAATAATT TTAATTATTG GTTTTTTCTC CTTTTCTATA TAGTATCTAT

AT3G17510.2

Model type
Protein coding
Short Description
CBL-interacting protein kinase 1
Curator Summary
Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2.
Computational Description
CBL-interacting protein kinase 1 (CIPK1); CONTAINS InterPro DOMAIN/s: NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 17 (TAIR:AT1G48260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G17520.1

Model type
Protein coding
Short Description
Late embryogenesis abundant protein (LEA) family protein
Computational Description
Late embryogenesis abundant protein (LEA) family protein; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell, seed, leaf; EXPRESSED DURING: dry seed stage, LP.04 four leaves visible, seed development stages; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant domain-containing protein / LEA domain-containing protein (TAIR:AT2G18340.1); Has 42102 Blast hits to 23885 proteins in 2451 species: Archae - 240; Bacteria - 12810; Metazoa - 10748; Fungi - 3745; Plants - 3219; Viruses - 271; Other Eukaryotes - 11069 (source: NCBI BLink).
Link
InterPro Scan - TAIR