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GT16738

CSHL Arabidopsis genetrap mutant lines

Original: GT16738

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT16738

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 96508 [Map]; Strand: c
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT16738 - 3-prime edge 
    AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATAGGT AGTACAAGGA 
    AGGTACAAAA GTGATGGTGA TCAATCTCTC GGGGACTCCG CGGGACAGAG 
    ACAGAGAGAG ATCTGGGATT TGGAGGAGAG TGTTAAAGCC AAAGGTTTTG 
    TTTACTACAA GTAGTCGTCT ACTTTGGCAT CACCTACTCC CACCACCAAA 
    GAGCCTCCTT CTCTTTACCA TTTTATTCCC CAATTTACCG TAAATGACGC 
    TTTTAACCTT GAGGGAGATA CTGGTAATTT TTTCTAGTAG TTCATCAGTC 
    TCTCAACAAC AAGAATCTGA GAATAACCAA AACTCTACCG TTTCGTCTAC 
    CCAAACTATC CTTCTCCTAC CATTGCCTCT T

AT2G01140.1

Model type
Protein coding
Short Description
Aldolase superfamily protein
Computational Description
Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink).
Link
InterPro Scan - TAIR