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GT16743

CSHL Arabidopsis genetrap mutant lines

Original: GT16743

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16743

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3267107 [Map]; Strand: w
      • AT1G10010.1 - [+] show detail - amino acid permease 8
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT16743 - 5-prime edge 
    CTTTCTCCCT GAGATTCACT GCCTCCATAA GCTTAGTGTA AGTCAAAGAT 
    TCTGATTTAT TTCGATTATT TTGTTATGGT TACTAACATG TTGTTCTGAA 
    TAAAAATACT AATAATTGTT TGATTGGTGT TTTTGTACGT CTTCGTTAGA 
    GCGATTGGGA AATCAAATTG TTATCATGAC AAGGGACATA AAGCGAAATG 
    TTCTGTATCG AATTATCCAT ACATGGCGGC ATTTGGGATC GTCCAGATCA 
    TTCTGAGCCA GCTTCCTAAC TTCCACAAGC TCTCTTTCCT ATCCATCATC 
    GCCGCGGTTA TGTCCTTCTC TTATGCGTCT ATCGGAATAG GCCTAGCCAT 
    CGCTACTGTA GCAAGTACAT TCCCCTTCTT TATCTTAAAA CATAGTGGTT 
    TATATGGATG ATCTCTCCCA ACTTCTGAAC AATNAACGNN GAAATGGGTA 
    TACAATATAT ATGAAAAGGT GGGAAGAATT GGTAAGACAG AATTGACAGG 
    GACAGTGATA GGTGTGGACG TAACTGCGTC TGAAAAAGTT TGGAAATTGT 
    TTCAAGCGAT TGGAGACATT GCCTTTTCAT ACGCTTTTAC CACTATTCTC 
    ATCGAGATTC AGGCATGTAC TACTGATTCC TACTATCTTC CGTTTACTAT 
    TGTTTTCATT TGCTTGTTAT TATTAATTTC GCCAAAAAGA GGTAAAATAA 
    GAATACCTTG A

AT1G10010.1

Model type
Protein coding
Short Description
amino acid permease 8
Curator Summary
Encodes a high affinity amino acid transporter that is probably responsible for import of organic nitrogen into developing seeds. One of eight gene family members that encode amino acid permeases. Most closely related to AAP1 (75%) identity.
Computational Description
amino acid permease 8 (AAP8); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 1 (TAIR:AT1G58360.1); Has 2959 Blast hits to 2943 proteins in 246 species: Archae - 0; Bacteria - 24; Metazoa - 771; Fungi - 529; Plants - 1378; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink).
Link
InterPro Scan - TAIR