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GT16751

CSHL Arabidopsis genetrap mutant lines

Original: GT16751

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16751

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19493763 [Map]; Strand: c
      • AT2G47500.1 - [+] show detail - P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calpon...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16751 - 3-prime edge 
    GGTAGAGTAT TTTACCGACC GGTACCGACC GGTTTCATCC CTACAACCTG 
    GAGCTGTCTC AAAGGTGAAA CCATTATCTT CTTCTTTTTC GACGATTATT 
    TTTTTTTTTT GGAAAACTCG GTTTTGGGGG GGGGGGGGGG AAAAATTTTT 
    TTTTTTTTGG GGGGGGGAAA AATTTTGGGG GGTTTTTTTT TTTGGGGGGG 
    GAAATGTTTT ATTTTTTTTT TTTTTTTGGG GGGGGGGGGG ATTTTTTTTT 
    TTTTTAAAAA AGGGGGGGGG GGGCCAAAAT GGGGGGGGGT TTTTTGCGAG 
    AAGGTTTGTT GTGCAAGAAG GTTTTTTTAT TTTTCCAAAA GAGAGAAAAA 
    GTTTGTTCCA AAAAAAATTC CTTTTTTTTT TTTTGGGGGG GGGAAAAAAT 
    CTCCGGGGGG GGGAGGGGGG GGGTGGGCAT ACAAAATTAG GGGGGAGAAA 
    AAAAGGGGGG GGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19493701 [Map]; Strand: c
      • AT2G47500.1 - [+] show detail - P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calpon...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16751 - 5-prime edge 
    CTTTCTCCCT GCCAGGTTGA ACCTTATTGA GGACTTTACA AAGGATAATT 
    CCACTTCTTA AACCAAGCCT AAGCCCTTCT TCTGTTGGCT CTGCAGGCAA 
    ATCCTTAGCT CCAACAACTC CAACCATCCT TCTCAGCCAA TTAGCCGCCT 
    CATATCTCCT CGATGCTACG CAAATGCAGA TAAACCATAA GCTCTTTCTC 
    TACAATTTAA CAAAACTATC AAAAGCTAAA AGCTAGTAGT CACTCTAAGG 
    AAGAAGAGAG CTATTCAATT TTCACAATAA ATTTTGAAAC CCAGAACAAC 
    AATTTTAATC AGATCAAACA TTCTGTGTTA TAGATCATGG ATGCTCAACT 
    ATCAGCTATA CACAATTCAC GAAAAAAAAA TAAAAAGAAT AGAGACCAGC 
    T

AT2G47500.1

Model type
Protein coding
Short Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Computational Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11938 Blast hits to 11443 proteins in 432 species: Archae - 0; Bacteria - 1; Metazoa - 5987; Fungi - 1397; Plants - 1883; Viruses - 0; Other Eukaryotes - 2670 (source: NCBI BLink).
Link
InterPro Scan - TAIR