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GT16752

CSHL Arabidopsis genetrap mutant lines

Original: GT16752

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16752

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 239421 [Map]; Strand: w
      • AT2G01530.1 - [+] show detail - MLP-like protein 329
        Distance: -284; Region: promoter
    Flanking Genome Sequence: GT16752 - 3-prime edge 
    AATTTAAACC TTAAACAAAC CATAATTATT GTTTGTTGAT ATGATGTATT 
    GTTCCTTGAA TGCCGAAAAG TCCACCAGAT AACGATACCG TAGATTTCCT 
    GCCAGCTGTG ACTTTCATTG ATATTTTTAA AACAATATCT TCTATTTTGT 
    TCATTTTTTC TAAAACAATA TCTTCTATTT TTGTTCATTT TTTAAACCAA 
    TCATCAAATA ACGTATATAA ACATCTTAAC TTAAGAGAAA CATCTAAAGT 
    AAAATACACT TCTTAGCTTT GGATTGTTGG TTTGCTTTAT TTTAATTGCT 
    TTTAATCCTA AGATTTTGCT AAGATACACT ACTGAGGGTG CTCTTATATG 
    TTATACACAT TTTTTTGATA ACAAAAGATT C

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19493702 [Map]; Strand: c
      • AT2G47500.1 - [+] show detail - P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calpon...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16752 - 5-prime edge 
    ACTTTCTCCC TGCCAGGTTG AACCTTATTG AGGACTTTAC AAAGGATAAT 
    TCCACTTCTT AAACCAAGCC TAAGCCCTTC TTCTGTTGGC TCTGCAGGCA 
    AATCCTTAGC TCCAACAACT CCAACCATCC TTCTCAGCCA ATTAGCCGCC 
    TCATATCTCC TCGATGCTAC GCAAATGCAG ATAAACCATA AGCTCTTTCT 
    CTACAATTTA ACAAAACTAT CAAAAGCTAA AAGCTAGTAG TCACTCTAAG 
    GAAGAAGAGA GCTATTCAAT TTTCACAATA AATTTTGAAA CCCAGAACAA 
    CAATTTTAAT CAGATCAAAC ATTCTGTGTT ATAGATCATG GATGCTCAAC 
    TATCAGCTAT ACACAATTCA CGAAAAAAAA ATAAAAAGAA TAGAGACCAG 
    CTTC

AT2G01530.1

Model type
Protein coding
Short Description
MLP-like protein 329
Computational Description
MLP-like protein 329 (MLP329); FUNCTIONS IN: copper ion binding; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 328 (TAIR:AT2G01520.1); Has 358 Blast hits to 331 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47500.1

Model type
Protein coding
Short Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Computational Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11938 Blast hits to 11443 proteins in 432 species: Archae - 0; Bacteria - 1; Metazoa - 5987; Fungi - 1397; Plants - 1883; Viruses - 0; Other Eukaryotes - 2670 (source: NCBI BLink).
Link
InterPro Scan - TAIR