1. Home
  2. Mutant Lines
  3. GT16826

GT16826

CSHL Arabidopsis genetrap mutant lines

Original: GT16826

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16826

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19683960 [Map]; Strand: c
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 1569; Region: intergenic
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 1106; Region: intergenic
    Flanking Genome Sequence: GT16826 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAAACCGAA 
    CCAAAATCAA TTTTCATTTC AAAACCATGT AAACCAAACA GAAATCACAT 
    GTAATTTCAA AACCATGAAC GCCGAACCGA AATCAATTGT CTTTTCATCA 
    AAACCATGTA AAAGGCTTCT ACGATTGTTT TAACTTGCCA CTGAAAATAA 
    TAATCCTAAT TTATCAACAG AGAAATATAG AGATACCAAC GAAACTATGG 
    GGATGACAAG TTATCATCAT GTCCACATCT CTGTCCAGTG TGAGTTTCAC 
    GAGTTGATTT AATAGGTAGC AAGGACCAGA AGCTGCAGCA GCAATGAAAG 
    CTGATCTTGT TTTAAAGCCA CCGCCAAGTC TTTTGGTTTT GCATACCGCT 
    TTCACACATT GGAAGACCAA GGAACATGAG ACACATATTT CTGCTGACCT 
    ATATACGAAT CATAAGTAAC CACCAATGTT GGCATAAGCA GAGAGTATGA 
    AAACTTTTGT TACTAATTTA ACATAAAAAC AGTATGATAA CAAAATGAAT 
    ACATGCGTAA ACTCTGCTTC TTCTAAGACA ACATATATAC TAAAAGTTCC 
    CCATTTGGGG CTCCATTTAA GAATGAAATT GAACAATTGA GGTTCAAATA 
    TTCTTACTTG TCC

AT2G48121.2

Model type
Protein coding
Computational Description
LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1).
Link
InterPro Scan - TAIR

AT2G48130.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1201 Blast hits to 1197 proteins in 63 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 0; Plants - 1190; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR