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Mutant Lines
GT16828

GT16828

CSHL Arabidopsis genetrap mutant lines

Original: GT16828

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16828

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 2; Position: 18114997 [Map]; Strand: c
- AT2G43700.1 - [+] show detail - Concanavalin A-like lectin protein kinase family protein
  Distance: -95; Region: promoter

TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
CTAGAAATTG TTTGTAGTTA TTACGAAAGT ACCCTCTCGG CTGAAGTTAA 
GAGGCTTATG TATATATCTA TTGGGCCACA ATAGGCCCAT TTAAGGTCGA 
CGTTTCTTCT ACCAACGATT CCTGTTTTTG CCGGCCGATC TGTGGACTGT 
GGATATAGCC GGAAATGAGT CACAGGCGAC GGGAGAGGTA TCGGAAGGAG 
GGAGTAACGG TTCGACCAGC GATATCTACG GCGACGGAGG CGATAATGCT 
CGGATATTTA ACCGACGGTG AGGGTTTGTA TTTCTCTATC TCTTTTATTT 
TATTTTACTT TTTTTTTGGT TTAATAAATA ACTTTTAAGC CCTTCTCTCC 
CCTCAAAAAA AAGGTTGGGC CCCAAAATTC CAAAAACCTG GATTTCCCCC 
CTGGGGGCCT TTTTAAAAAA ATATTTTCCT GCCCAAAATT TTATTATGGT 
TTTGAAAGCC TCCCCTTGAC CTTTAATCTG GTTTTCCAAG ATTTTAACCA 
CCCCCAAAA

5 prime edge [+] show sequence

Chromosome: 2; Position: 18148688 [Map]; Strand: w
- AT2G43800.1 - [+] show detail - Actin-binding FH2 (formin homology 2) family protein
  Distance: 0; Region: exon4 (CDS)
- AT2G43810.1 - [+] show detail - Small nuclear ribonucleoprotein family protein
  Distance: -623; Region: promoter
- AT2G43810.2 - [+] show detail - Small nuclear ribonucleoprotein family protein
  Distance: -623; Region: promoter

TCGCCATCGA ACCAGACCGC CACGCCTCTG TTTCCGGTGG TTATCAATAA 
CAACTCACGG CTAAGTCCAT CGGGTTCTCT AGACGACGAC GATGGCTCGT 
TCTAAGTGAA AACTGTTGGC TCGGGTTTGG TTCGGTGTAT GCTAATGTTT 
TGGTTTCATT TGCTACGTAC TCAAGTAATA TATGTGTTAT ACATATTTAT 
ATTTTTATTG ATAGGCGAAT TTAAATAGAT TTTGGCAGAT TGTTGCAAGT 
TGCTATCATC GGGCTCTGTA CGTGTTCCAG TCCTCTGTTG AATTATTTAT 
GTCACGTGTA GATGTATTTA TTGATCTAAA CCTAAAACGA TAGAAGAACT 
AAAGTCTTGT GAAAAGTTAA ATTATTGCAA GCTATACTAT TTACAAAATG 
TAAAAAAAGA AACTGAAATT ATTCTTTTGT TTGGTTCACA TTAGGCATTT 
CCAAATTGCT GATGTCAAAC ATCTTTGCAA AGTTCTTCTC CCAACGAATT 
TTGAAAATTC ACCATTTTCA CGATTAAAAT TTTAAAATTG ACTAAAAAGT 
TTTAATCTCG CACATAATTA AACCACAATA AAAAAACTTG GACTTCGGAT 
TGTTTTCCAT GTGGGCTGAT TCGAATTTGG GCTTGGGCCT TTTTAATTGG 
AATTTTATTT TTACTTATTT GTAAATGCGT CACATGT

AT2G43700.1

Model type: Protein coding
Short Description: Concanavalin A-like lectin protein kinase family protein
Computational Description: Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT2G43690.1); Has 122686 Blast hits to 121162 proteins in 4906 species: Archae - 111; Bacteria - 13587; Metazoa - 45416; Fungi - 10588; Plants - 34514; Viruses - 415; Other Eukaryotes - 18055 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G43800.1

Model type: Protein coding
Short Description: Actin-binding FH2 (formin homology 2) family protein
Computational Description: Actin-binding FH2 (formin homology 2) family protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homology 1 (TAIR:AT3G25500.1); Has 24262 Blast hits to 14906 proteins in 847 species: Archae - 39; Bacteria - 2066; Metazoa - 8621; Fungi - 3513; Plants - 5949; Viruses - 1021; Other Eukaryotes - 3053 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G43810.1

Model type: Protein coding
Short Description: Small nuclear ribonucleoprotein family protein
Computational Description: Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G59810.1); Has 1180 Blast hits to 1180 proteins in 300 species: Archae - 305; Bacteria - 0; Metazoa - 337; Fungi - 255; Plants - 126; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G43810.2

Model type: Protein coding
Short Description: Small nuclear ribonucleoprotein family protein
Computational Description: Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G59810.1); Has 1180 Blast hits to 1180 proteins in 300 species: Archae - 305; Bacteria - 0; Metazoa - 337; Fungi - 255; Plants - 126; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink).
Link: InterPro Scan - TAIR