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GT16829

CSHL Arabidopsis genetrap mutant lines

Original: GT16829

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16829

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 137598 [Map]; Strand: w
      • AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: exon1 (5UTR)
      • AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: exon1 (5UTR)
      • AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT16829 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACTC 
    ATCGGAGACA AACACATATT CACGCTAAAT CAACTAAATT AAGCTTAGAT 
    AGATATATAG ATATATAGGT AAAAACTCAA CTACGACTAC TCGGAGATGT 
    TGGGTGCTGG ATTTCAGTTG ACGAGAGGCA GACACGGCGA CGATCCTTTC 
    TACACTTCCG CAAAAACTCG CAGGGCCAAT CAGCGCATCG ATCAGCTCCG 
    TAGAGCTCAG AGCGACGTCT CTAACGTTCC ATCATCAGCT CCTTCTCCGC 
    ATAAACAACA ACTCGAGCCG TCCGATTTAT CTTCCAGTAA TCTAGATCGG 
    TTTTTAGAGT CGGTCACACC ATCCGTACCG GCTCAGTTTT TATCCAAGGT 
    TTATTACAAT CTCTATTTCT ATGGGGTTTT TTTTTTAAAC CAAAGCCGGG 
    GTGGTTCCCG GAGGGGGAGG GGGAAAATCC CGGGGAAAAC ATCCCTCCGA 
    GAAAAAAGAG CAAATGAGGT TTTTAATAAA CTTGGGCCTT ATTTGGGGCT 
    GGGGGATATA GGGGACCCAT TTGCAAAGGG GAGGGTTTAC GGCCCCGGGG 
    GGCCTCTTGT TTTGAAAAAC AACAAGGACC GGGTTATCCA AAACTATGCC 
    CCTTCTTTGC CAGCCATTCA AATCTAGGCC CATTCCCAGG CCT

AT2G01260.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 265 Blast hits to 263 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR