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GT16834

CSHL Arabidopsis genetrap mutant lines

Original: GT16834

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16834

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT16834 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT GCTAGTGGTG 
    GAAATCTGAG TCCAATCAGT ATCAAAAAAC GAAATCCATC GGTGACCATA 
    GATATATCAT CGGGTACCTG GAGATGTGAA GAAATTATCT TAACTGTGGA 
    TTAAGTAGAT AGAAATGGAC GATATCAGTT GTTTGTTTCA TTGTTTTATC 
    AATTCTTATA CTTGTTTAGG CCGTAGGTTT TTTAACAGAG CGAAACAGAG 
    CACAAATGAA GAGATAATGA AGGATATACC CGAAAGAAAA TATTCACGGA 
    ACCAGACAGA CTTTTGACTA TAAGAATACA CTTAATCAAC TACTCTTTAT 
    TAGTACAACA AGTAGACAAC ACTCAAAACT ATCTTGCCAT GGGAACCACG 
    GAAGTGTCCA AGTCAACGTT CATCTCACTC GAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18522905 [Map]; Strand: w
      • AT3G49950.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16834 - 5-prime edge 
    CCTACTTTCT CTCTGTCTCA CGCCGATGAA CTCCATCGTT TCTCAGTCGT 
    GGAGTTAGCC GCTTTCGTAG ACCTCACTCC GTGGCACCGG TTCGGATACA 
    TAGCAGCCAA CGCCGCGATC TTAACCGCCG TTGAAGGTTA CTCAACGGTT 
    CACATCGTTG ACTTAAGTTT GACTCATTGT ATGCAAATCC CTACTCTTAT 
    AGACGCCATG GCAAGCCGAC TCAACAAACC TCCTCCGCTT CTTAAACTCA 
    CCGTCGTCTC TTCCTCCGAC CACTTCCCAC CATTCATCAA CATCTCCTAC 
    GAAGAACTCG GATCTAAACT AGTCAACTTC GCCACCACAC GAAACATTAC 
    AATGGAGTTC ACAATCGTAC CT

AT3G49950.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G67411.1); Has 2188 Blast hits to 2164 proteins in 278 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2186; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR