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Mutant Lines
GT16848

GT16848

CSHL Arabidopsis genetrap mutant lines

Original: GT16848

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16848

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 96977 [Map]; Strand: c
  - AT4G00230.1 - [+] show detail - xylem serine peptidase 1
    Distance: 0; Region: exon11 (CDS)
  - AT4G00231.1 - [+] show detail - ARM repeat superfamily protein
    Distance: -522; Region: promoter
Flanking Genome Sequence: GT16848 - 3-prime edge
```
CCGTTTTCAT CCCTACCTCC ATTGTCCCTG GACTCGGCCA CGATTCCCTC 
AACTACCCAA CAATCCAGCT CACGTTGAGA TC
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 96948 [Map]; Strand: c
- AT4G00230.1 - [+] show detail - xylem serine peptidase 1
  Distance: 0; Region: exon11 (CDS)
- AT4G00231.1 - [+] show detail - ARM repeat superfamily protein
  Distance: -551; Region: promoter

GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACCTCCA 
TTGTCCCTGG ACTCGGCCAC GATTCCCTCA ACTACCCAAC AATCCAACTC 
ACGTTGAGAT CCGCCAAAAC GTCCACATTG GCTGTGTTCA GGCGGAGAGT 
CACCAACGTG GGACCACCGT CGTCGGTCTA CACCGCCACC GTCAGAGCAC 
CGAAAGGAGT AGAAATCACG GTGGAGCCAC AGAGTTTGTC ATTTTCAAAG 
GCTTCACAAA AGAGAAGCTT CAAAGTGGTG GTGAAGGCCA AACAAATGAC 
TCCTGGGAAG ATTGTGTCCG GCTTGCTCGT GTGGAAGAGC CCACGTCACT 
CTGTTCGTAG CCCCATTGTT ATTTATAGTC CTACTTCGGA TTGAAATTAA 
TCACATCTCC AAAACAACAT TTTACTTCAA TGTAATCCTC TCACTTGTTC 
GTAAACTAAC TCATTCCACT GCTTAATTTG AAAAAACCAC TGTATTAAAC 
TTATAGGCCA ATAAGCCCAT ATTAGAATAT TTGGGCCTTT GGGCCCATTA 
CACGAAACAC TATTTACAGA ATAACCTCTA CCTCTCTCTC TATCGGAAAA 
GCCCTAAAGC AAGCTTCTCT CCTTCGTCGT CAATGGAAGC TTCTCTACCG 
GAAGAGGTGC TTCAGCCGCT TCTACATGCT TCAGATTTA

AT4G00230.1

Model type: Protein coding
Short Description: xylem serine peptidase 1
Computational Description: xylem serine peptidase 1 (XSP1); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT5G03620.1); Has 8915 Blast hits to 7721 proteins in 1255 species: Archae - 263; Bacteria - 5173; Metazoa - 170; Fungi - 606; Plants - 1952; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00231.1

Model type: Protein coding
Short Description: ARM repeat superfamily protein
Computational Description: maternal effect embryo arrest 50 (MEE50); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Ataxin-10 domain (InterPro:IPR019156), Armadillo-type fold (InterPro:IPR016024); Has 293 Blast hits to 290 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 110; Plants - 41; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Link: InterPro Scan - TAIR