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Mutant Lines
GT16855

GT16855

CSHL Arabidopsis genetrap mutant lines

Original: GT16855

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16855

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 4526588 [Map]; Strand: w
  - AT5G14020.1 - [+] show detail - Endosomal targeting BRO1-like domain-containing protein
    Distance: -725; Region: promoter
  - AT5G14030.1 - [+] show detail - translocon-associated protein beta (TRAPB) family protein
    Distance: -196; Region: promoter
  - AT5G14030.2 - [+] show detail - translocon-associated protein beta (TRAPB) family protein
    Distance: -196; Region: promoter
  - AT5G14030.3 - [+] show detail - translocon-associated protein beta (TRAPB) family protein
    Distance: -196; Region: promoter
  - AT5G14030.4 - [+] show detail - translocon-associated protein beta (TRAPB) family protein
    Distance: -196; Region: promoter
Flanking Genome Sequence: GT16855 - 3-prime edge
```
TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT AGTCCTGCCA 
CAATCTAACA TGTTTCTTTT CCCACACCAC ATTTCGATTG GATCCAAATA 
TTCTCTAATA CTTTTATAAT CATAGATGAC TTTGTCTATT AATTATCTCG 
TCTAATTATA AAGTCTACTT AAGATGTAAT AGCCAACGA
```

5 prime edge [+] show sequence

Chromosome: 5; Position: 4217877 [Map]; Strand: c
- AT5G13210.1 - [+] show detail - Uncharacterised conserved protein UCP015417, vWA
  Distance: 1191; Region: intergenic
- AT5G13220.1 - [+] show detail - jasmonate-zim-domain protein 10
  Distance: -1011; Region: intergenic

CCTACTAGTG CTCGTTTCCT AACAGATTTA CATATTATTA CATTGTTCTC 
AAGTAAAGTT ATAGAGGGAT TCAATGAACT CACGTTTTTC TTTCTTGTGA 
AAATATACCT TGAACCACTT CCGAATTAAA TTGACCTCAA TTTTCTATCT 
TGTGATCAAA TTTAAACTTC ACCTTATTCT ATCGCGCGCA TGTTAGCTTA 
ATTAGTTACA TTTCTCCTTT TTACTATTTT AAATTAAAAA TCATATAACT 
ACAAAATGTA GTGATTACGA AAACTAAATT TTTTTATTAA TATTCTGAAC 
TAATCAAATA TTAAAAAAGA ATTACGTATA AAAAACTTTT TTAGTAGTAT 
ATATTTGATG CCGAAAGTGA AAGTTTTTTC TTTTTTTTTT TCTGGGCACC 
CAAAAGGAAA AAATTTAAAG CCTTGTTTTC CCCGGGTGGG GACCTGTAAA 
AGAAGAATTA AAGGCCAAAC CATTTCTTTT TCCCCAGGGC AAGGGGGCCC 
TTCCCAAAAA GCTTTAAAAG GTTTCCGCCC CTCTTTTTCA TTTTCCCCCG 
TCCCAAAGCA AAAACCCCTT ATTTATTCTT TTTCTCCCAA TAATTTTAAT 
TGGGGTAACC CCACGTTTGG CCGGGGCGCC CAATTTTAAA GGCCAAGGTT 
TTT

AT5G13210.1

Model type: Protein coding
Short Description: Uncharacterised conserved protein UCP015417, vWA
Computational Description: Uncharacterised conserved protein UCP015417, vWA; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP015417, vWA (InterPro:IPR011205), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP015417, vWA (TAIR:AT3G24780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G13220.1

Model type: Protein coding
Short Description: jasmonate-zim-domain protein 10
Curator Summary: Plants overexpressing At5g13220.3, but not At5g13220.1 showed enhanced insensitivity to MeJa.
Computational Description: jasmonate-zim-domain protein 10 (JAZ10); FUNCTIONS IN: protein binding; INVOLVED IN: response to jasmonic acid stimulus, regulation of systemic acquired resistance, response to wounding; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 12 (TAIR:AT5G20900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G14020.1

Model type: Protein coding
Short Description: Endosomal targeting BRO1-like domain-containing protein
Computational Description: Endosomal targeting BRO1-like domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: vacuole; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: Endosomal targeting BRO1-like domain-containing protein (TAIR:AT1G73390.3); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G14030.1

Model type: Protein coding
Short Description: translocon-associated protein beta (TRAPB) family protein
Computational Description: translocon-associated protein beta (TRAPB) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated beta (InterPro:IPR008856); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G14030.2

Model type: Protein coding
Short Description: translocon-associated protein beta (TRAPB) family protein
Computational Description: translocon-associated protein beta (TRAPB) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated beta (InterPro:IPR008856); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G14030.3

Model type: Protein coding
Short Description: translocon-associated protein beta (TRAPB) family protein
Computational Description: translocon-associated protein beta (TRAPB) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated beta (InterPro:IPR008856); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G14030.4

Model type: Protein coding
Short Description: translocon-associated protein beta (TRAPB) family protein
Computational Description: translocon-associated protein beta (TRAPB) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated beta (InterPro:IPR008856); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR