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GT16856

CSHL Arabidopsis genetrap mutant lines

Original: GT16856

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16856

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7994233 [Map]; Strand: c
      • AT1G22610.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: -58; Region: promoter
    Flanking Genome Sequence: GT16856 - 5-prime edge 
    ACTTTCTCCC TGGGCAAACT CGGGGAACAC ACGTGAGGTC AACAAGAAGA 
    CGTCATTTTA GTCAAATTTT ATACATATAA TAGTTTTATA ATATGGTTGT 
    AAGAAATAGA GAGAAATGAA ATTCTCAAGT TGAATTGTTT TGTTATTATA 
    CTCAATGAAT ATTTTTGTTG AATATTCTTG ATTATTGCTT TTTAACTTAT 
    GAATCATTTG GTTTACTTTT TCGAATATTG TATTCGTCGG GGATTTCACC 
    AAATATTCGT ACGTATAGTT GATGGAGAAT AAATTAAACT TTGATGAT

AT1G22610.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 9288 Blast hits to 5214 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 6273; Fungi - 392; Plants - 2016; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink).
Link
InterPro Scan - TAIR