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GT16881

CSHL Arabidopsis genetrap mutant lines

Original: GT16881

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16881

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22501896 [Map]; Strand: c
      • AT3G60900.1 - [+] show detail - FASCICLIN-like arabinogalactan-protein 10
        Distance: -657; Region: promoter
      • AT3G60910.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16881 - 3-prime edge
    AATGAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TAGCTGTGGC AACTCCCGTA ATTCTCTCTC CTTTTGCCAA TAGATTTGAA
    GAAGTCTGTA CCAGTGATTG AATTTGACTT GAGCAGCAAC CAAATTTAAT
    ACACTGTGAT TGCCCTGTTC TNCCTCTCTG GAGTAGTGAT GTCAGAGGAT
    ATGGTGAAGG ATGGGTATGA GGACATCATG AATGTTGATA TCTCTTCAGT
    GGCTATTGAG ATGATGCAAA CCAAATATGC ATCTGTTCCT CAGCTCAAAT
    GTAACACTTC TTTTCACATC TCTAGTTTAT ATTACTTTAG CTTTAGAAAT
    ATGTAAGTAA GAAGCTTTAT CCTATTATAC TCTGTTTTTA CCCAACAGAT
    ATGCAAATGG ATGTTAGAGA TATGAGTTAC TTTGAAGACG ATTCATTTGA
    CACTATTATT GATAAAGGTA TGTTGCAGCA ACCACCAATT ACTCTGTTTT
    TATGGTGAAA AGCTTAGAAG TGATATATTG TTACCTGTTG TTGCGGCTGC
    TGGATTGTGT AGGAACCCTT GATTCATTGA TGGTACGGAA CCTGATCTTT
    TGTTTCT
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22501843 [Map]; Strand: c
      • AT3G60900.1 - [+] show detail - FASCICLIN-like arabinogalactan-protein 10
        Distance: -604; Region: promoter
      • AT3G60910.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16881 - 5-prime edge
    ACTTTCTCCC TGGCCACGCC AACCATGAGG ACTCGTGAAG AAGTAGAGAC 
    GAAGCTGCGG ACAAAAGGGC GGAGAGTAGA GTAACATTGG TACCAGTCGA
    AAGAAAGCGC GTCTTGCACG TAACGAGCGT CCCAATAGAG AGCGTCTCCA
    TAGTTGTAAG TGTTGCAGCT CGACACGTCC CTCTGCATCT TTCTCTCTCT
    CTCTAAAGAT CCGATCTCAG ATTCTGCGGC GGAGCTTTTT CTCTTCGTCG
    TTGTTTTTGA CCAGCTTACG AAGTTTGGGC TTATTACAGG CCCAATACAT
    AATCATGTGA AGCTGAAGAG TGACACGTGC TCACACGTGT TATTAGCCTC
    ATAATTGGGC TCAAAGTAAG GAATTAAAGC CTCATCTCCG CCCATTAATT
    AATACGGAGT AATAGTTTAC TGATTTGTGA AGGTTTATTT TATTTTTTTC
    TAATCAAATG ATAAAACTTT TGCAGATTTT TACATGACAG TAGTAAACTA
    CGTATTTTGA TTTGTCGTTT TTATAAAAAA ATAATAATTT CTTTATCAGT
    GCTGTGTCGG GCAATTAGAA CCTTCTTTCC ATTTCTAAAA GATGTTACCA
    ACTATTGACC AAGTATTTAA AACTGATAAC GACACTTATT TATGAGTCTA
    CTAAGTACTA ACGATATTCC TAGTTGTCAA GTAAAAATAT CTAAATCCTT
    TTTATCTGAG TGCCTTTACA AAATTTTGGA TGATTATCTA ATGAGCATCC
    ATAAATAAGC TCAAATTTTA GTTAGCTACT TGACCATGGT TAACTCTA

AT3G60900.1

Model type
Protein coding
Short Description
FASCICLIN-like arabinogalactan-protein 10
Computational Description
FASCICLIN-like arabinogalactan-protein 10 (FLA10); LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 12874 Blast hits to 6768 proteins in 802 species: Archae - 107; Bacteria - 3922; Metazoa - 1175; Fungi - 784; Plants - 2143; Viruses - 697; Other Eukaryotes - 4046 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60910.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G17365.1); Has 1732 Blast hits to 1731 proteins in 520 species: Archae - 43; Bacteria - 761; Metazoa - 337; Fungi - 50; Plants - 206; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink).
Link
InterPro Scan - TAIR