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GT16892

CSHL Arabidopsis genetrap mutant lines

Original: GT16892

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16892

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8853721 [Map]; Strand: c
      • AT2G20562.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana p...
        Distance: -2792; Region: intergenic
      • AT2G20570.1 - [+] show detail - GBF's pro-rich region-interacting factor 1
        Distance: -1637; Region: intergenic
    Flanking Genome Sequence: GT16892 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGGTAC CGACCGGTTT CATCCCTACC 
    TATGAGGACC TGAAAGTATG TGGAATTTCT TACAATTTTC TTCCTTCACG 
    ATGTATATAT ATATATGCCG CACGAATATT GTGAGCGTGA ATTCAATTCA 
    AAAAATGTGA TGTGGAAACG AGCAACAACA ATTATTGTAT CTCTTGAGGA 
    CCCATAGGAC GTGCATGTCC ACTTATACCT AATGAGACAA TTCTGTCCTT 
    TTTTATAAGA GCATCTTCCA CAGCTTAATT TGCGAGCCTC ATTCACGTCA 
    ATATATAAGG GGTATGTGAT ACGGTAGATG GAGAGATTAT TTACATCCAT 
    CTACATGTAA GTTGACCAGC ATAGACCTTT TACATAGTGA CATAGAACCG 
    TTGAAATGCC ATCCGATTGA TCAATAATGT TGGGACAGAC CAAAACCAAG 
    ATACCCGACC GGATCGTATC GGTATATTCA TCTCCACT

AT2G20562.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31090.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G20570.1

Model type
Protein coding
Short Description
GBF's pro-rich region-interacting factor 1
Curator Summary
Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.
Computational Description
GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1); Has 2420 Blast hits to 2125 proteins in 147 species: Archae - 0; Bacteria - 17; Metazoa - 163; Fungi - 64; Plants - 2094; Viruses - 12; Other Eukaryotes - 70 (source: NCBI BLink).
Link
InterPro Scan - TAIR