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Mutant Lines
GT16901

GT16901

CSHL Arabidopsis genetrap mutant lines

Original: GT16901

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16901

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 11133488 [Map]; Strand: w
- AT4G20770.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: -402; Region: promoter
- AT4G20780.1 - [+] show detail - calmodulin like 42
  Distance: 0; Region: exon1 (CDS)

TCCTACTTTC TCCCTGGGTA AACCAAGTTT CTTCAGAACA GTTTGCAGTT 
CTCTAGCGGA GATGAATCCA TCACCGTTCT CATCAAACAC CTTAAACGCC 
TCGGCGAGAT CCGATTCATT TTCAGCTGCG GAAGAAGGAT CATCTTCGTT 
TTCTCCTCCT CCACAAGCTC CACCGAAGAA AGAATCGTCG AGTGTTTTGT 
GAAGAGAAGA GAAATCATCG AAATTGAGAC CAGTGTTACC AGGTTGGATG 
TATGATTCAA CGGTGGATTT GAGATCGGAG AGATCAGCGT TGAGACCAAG 
ACGTGTTAGA GCTTGGCTTA GCTCTTCGAC GGTTATGAAT CCGTCGCCGT 
TTTTGTCGAA TAAGTCGAAG ATTCGTTGGA GACGAAGTGC GTTTAGGCTT 
GGGCTACGTA GTCTGAAGGA TGATGATTGT CTTGCAACTT TCTTCTTCTC 
CCTGGAGTAA CTCTCCATTG TTATCTTGTG TTCTTCTTCT TCTTCTTGTT 
CGTTTGTGGA ATTATAATCT GAGATTGAGA AATTGAGTGA TGAGGGCTAA 
TTATAGAAGA GAAACAATTG GTGAATTA

AT4G20770.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G02330.1); Has 56027 Blast hits to 13813 proteins in 239 species: Archae - 0; Bacteria - 4; Metazoa - 154; Fungi - 170; Plants - 55018; Viruses - 0; Other Eukaryotes - 681 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20780.1

Model type: Protein coding
Short Description: calmodulin like 42
Curator Summary: Calcium sensor involved in trichome branching.
Computational Description: calmodulin like 42 (CML42); FUNCTIONS IN: calcium ion binding; INVOLVED IN: trichome branching; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 43 (TAIR:AT5G44460.1); Has 15351 Blast hits to 11255 proteins in 1265 species: Archae - 0; Bacteria - 33; Metazoa - 5903; Fungi - 3155; Plants - 4145; Viruses - 2; Other Eukaryotes - 2113 (source: NCBI BLink).
Link: InterPro Scan - TAIR