1. Home
  2. Mutant Lines
  3. GT16915

GT16915

CSHL Arabidopsis genetrap mutant lines

Original: GT16915

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16915

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT16915 - 5-prime edge 
    CTTTCACTAC GGAGAAGATA AAACCTTAAA ATCGACGGCC A

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23120037 [Map]; Strand: c
      • AT3G62499.1 - [+] show detail - YTH family protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G62500.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G6...
        Distance: -386; Region: promoter
    Flanking Genome Sequence: GT16915 - 5-prime edge 
    CCTACTTTCT CCCTGTCAGC GCTTTCCTAC GGAGAAGATA AAACCTTAAA 
    ATCGACGGCG AAGGAAGACA AAAGAGGAGG AGAAAGATAT TGTGTTCTGA 
    TGAGGGAAGA CTGTGAATTT TCAGGCCTAC AAAAGTAGTT GTAGGCGCCA 
    AGTCGAAAAC TTCCTTTTCA TCAAATCCGA CGACGCGCAT CAATTGAACA 
    ATTCTCTCTC TTTTCTTCTT TTAAAAAAAA AATTAAAAAA GCTTCTTAGG 
    CTATATATTG GGCCTAAGTT GTTTCTTTTA TTAATTGGGT T

AT3G62499.1

Model type
Protein coding
Short Description
YTH family protein
Computational Description
YTH family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G62500.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G61740.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR