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GT16934

CSHL Arabidopsis genetrap mutant lines

Original: GT16934

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16934

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18486629 [Map]; Strand: c
      • AT2G44820.1 - [+] show detail - unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; ...
        Distance: 819; Region: intergenic
      • AT2G44830.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -3500; Region: intergenic
    Flanking Genome Sequence: GT16934 - 3-prime edge 
    TAGAGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT AACTATTAGT 
    ACATGTCTAG TTGTCTACCT CAAAACTCGA TTACATATGT GTAAAGTAGT 
    TAATGACACT TACATACTAG TCACTAGAGA AGGTTAAGTC TTATATTCGA 
    GCTTCTTTGT A

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18486564 [Map]; Strand: c
      • AT2G44820.1 - [+] show detail - unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; ...
        Distance: 754; Region: intergenic
      • AT2G44830.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -3565; Region: intergenic
    Flanking Genome Sequence: GT16934 - 5-prime edge 
    CTTTCTCCCT GCTATAGTGA CTAGAGCTTC ACCACCCTAA TTTGTCAACA 
    AGTCACGATT TAGGGACACG TACAAGGTGG AAAGAATTGG ACGGCGAAGC 
    CGCAAAAGAA AAGCCTAAAT GGGTCCAGAT TCCAGCTAGG AAGTGAAGTG 
    TTGTAATCAT CCATCAATTC AATGTATTTT TGGCACTATC AACATAAAGC 
    ACTTAATATC ACATCATTTC ATGGAAAACA AATTCCTATT CGGATCGAGA 
    CCAATAGTTG AGTACTAATC CACGACTTTC AACTTCAGCT ATCTATAATC 
    ATTTGATGTA AGATATGTGG ATGAGAAGCC CAAATCAAAA AACGGCGGGA 
    ATTTTTTTGT ATAATTAGCA TAATCTTTTT CAATCGCCTT TCCGGCCAAA 
    AAAGTAAGGA TTCAAAAACG TTATTGACGT GAAAATTTAA ATAACCGAGT 
    AAAAACATAT GATTTCTCGC TTTTGTGGCC TAACTCGCAA AGCTTTTTAG 
    GACTCTTTTA GTTTAGAGAA TTGGGGGAAA TCAAAAATTA ATTATTAGGA 
    ATTTAGGATC TAGTAGAGAG ATATCCACCC ACGCTTTTTC TTTTGATACT 
    CGGTCAAAGT CCACAATCAT TTCATACTCT TCTAGTACAA GTAAAGCTTA 
    AAAGTTATAC AATTTCAAAT TGAAGTTATC ATCAAAAATA TTAGTCTGGT 
    ATCCAAGAAA TCAATTTCCT AGTAAACGAA CTTGCATTTA TCTGGGATCT 
    GACTACATTA ATAAAGTATT ACAATGTCTA GAAATATTTA ACATATTG

AT2G44820.1

Model type
Protein coding
Computational Description
unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4; Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G44830.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 114332 Blast hits to 86906 proteins in 3497 species: Archae - 36; Bacteria - 13769; Metazoa - 45842; Fungi - 12821; Plants - 20261; Viruses - 350; Other Eukaryotes - 21253 (source: NCBI BLink).
Link
InterPro Scan - TAIR