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GT16939

CSHL Arabidopsis genetrap mutant lines

Original: GT16939

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16939

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18486622 [Map]; Strand: c
      • AT2G44820.1 - [+] show detail - unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; ...
        Distance: 812; Region: intergenic
      • AT2G44830.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -3507; Region: intergenic
    Flanking Genome Sequence: GT16939 - 3-prime edge 
    GAAACGGTAG AGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAC 
    TATTAGTACA TGTCTAGTTG TCTACCTCAA AACTCGATTA CATATGTGTA 
    AAGTAGTTAA TGACACTTAC ATACTAGTCA CTAGAGAAGG TTAAGTCTTA 
    TATTCGAGCT TCTT

AT2G44820.1

Model type
Protein coding
Computational Description
unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4; Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G44830.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 114332 Blast hits to 86906 proteins in 3497 species: Archae - 36; Bacteria - 13769; Metazoa - 45842; Fungi - 12821; Plants - 20261; Viruses - 350; Other Eukaryotes - 21253 (source: NCBI BLink).
Link
InterPro Scan - TAIR