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GT16947

CSHL Arabidopsis genetrap mutant lines

Original: GT16947

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16947

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17659900 [Map]; Strand: c
      • AT4G37580.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT16947 - 3-prime edge 
    ATCGACCAGA GCTCCATGAA CTCTCAACAA ATAAGATTGC GTCATTGCAT 
    TTTAGGTTAA TGTCTATGAA ATGCAGACCA TCTTGCTTTT ATCATTTTTG 
    TGCTTTCTTA AGTAGATACT TTGGCTTATT CTCTCCACTC GACAATTAAT 
    AACAAACTCT CGCTTGGGAC TTTCGTCGCG GTGCCACGTG GAAGCTGTTA 
    TGGATCCGGG TCTGGATCAT GGCCCGGTTC GGCTAAATTC CTCGAATATC 
    CACCCGACCG GAGCGCCGCG GTATGCATGT GCGCTCTGCA AAGACTCGTT 
    TCTGTTAGAA GTACGTGGAG CGTCGAGATT GAGACGTGTG GTGGCTAAAA 
    CGACGCGAGT AGTTGATAAA ACGTTGCCGT TTCTGAAACT ACCTTCGATA 
    C

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17659663 [Map]; Strand: c
      • AT4G37580.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT16947 - 5-prime edge 
    TCCACTTTCT CCCTGTTACG AGCTTAAACC CAATCCCTTG TCTCCTGCAA 
    AAACCAAAAC TAGTTTAGAT AACCAAAATC TATAATAGCG TGTGATTATG 
    AGTGGGAGGA AAACGGAAGG GTACCTGTGA AAAGGAGAGA CGCGAAGGCC 
    CAAGACGTAA GCGAGTTTAG TGTAAAGAGG CTTAACGACA TCGTTTTGAG 
    ATTTGTGATT TAAATCGAGT TTTTGGCCAC ATGTAACGGT TTTGATACAT 
    CCTCTAATCA TGCCCACTAT CTCCTTC

AT4G37580.1

Model type
Protein coding
Short Description
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Curator Summary
involved in apical hook development. putative N-acetyltransferase
Computational Description
HOOKLESS 1 (HLS1); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G23060.1); Has 145 Blast hits to 145 proteins in 38 species: Archae - 22; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR