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Mutant Lines
GT17008

GT17008

CSHL Arabidopsis genetrap mutant lines

Original: GT17008

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17008

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 3481600 [Map]; Strand: w
  - AT3G11120.1 - [+] show detail - Ribosomal protein L41 family
    Distance: 152; Region: intergenic
  - AT3G11130.1 - [+] show detail - Clathrin, heavy chain
    Distance: 549; Region: intergenic
Flanking Genome Sequence: GT17008 - 3-prime edge
```
TTTTCCCACC GTTCCGACCG TTTTCTCCCT AACCGTAAGG GGCCAACTAG 
ACTCTATTCC AGGAATCAAA TCAGACAACT AC
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 3481610 [Map]; Strand: w
- AT3G11120.1 - [+] show detail - Ribosomal protein L41 family
  Distance: 162; Region: intergenic
- AT3G11130.1 - [+] show detail - Clathrin, heavy chain
  Distance: 539; Region: intergenic

AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT AACCGTAAGG 
GGCCAACTAG ACTCTATTCC AGGAATCAAA TAAGACAACT ACAAGCATAT 
TCACTTTGTT CCTATGATCA TCTTCTAAAG CATCCATAGC TATATATTCC 
CTCCAATCAT CAACATCTGA AGCAATCACC CAAATCTAAT CTCAAAATTA 
TAATTCAGAG AATAGTAGAA CATCAACATT TGTAAGATAT ATAATAGAAA 
ACATAACTTC CATATTAATT TGGTCCAACG AAACATTCAA ACTGAAACTC 
AAAACAGAGT TGGATTTAAC AACGAAAGCA AAACAGAAAA CCAGGTTTGT 
TCGAAAATCT ACTTAGATCG CTGTCTCATC TTTCGTCTCT TCCTCTTTAA 
TCTCCTCATA CGCTTCTTCA TCTCACTCGA

5 prime edge [+] show sequence

Chromosome: 1; Position: 27952585 [Map]; Strand: c
- AT1G74340.1 - [+] show detail - dolichol phosphate-mannose biosynthesis regulatory protein-related
  Distance: -917; Region: promoter

CCTACTTTCT CCCTGCTAGC ATCTATGTTG TGTCTTCTGA CACTGGAATG 
CATAATGATC AAAATTCTAA AAAAATCAAA GTGGTACCAA TTTTAAAGTT 
ATTAACTTCC ACCAGTTGAA AAGAAAAAAC TAAAGGAAAC CTCCGATAAA 
AAAACAATGG TCCATTCAAC AACACTAAGG ACGTGTGAAT GGAATTGAGC 
CAACATTGTT CATGCCAAAA CAACTAAGGC AAACAACTAA GGCGACCAAA 
CAAAAGAAAA TTTTGCTATG AAATTTAAAA GTCCATGCCA CTTGAAAGCC 
ACGTCGTTTG TGCGTTTTGG TTTTTCTCTG CGTACCCATT TGATGTTTTG 
ATGTTTCCAT TGGTCAAATT CAACATTATC ACCTAAAATA ACTTGCACAT 
GCACGACACC AAATTAAATA GCTTTGGATC CAATAAGAGA AAGTATATAT 
TGTAGGTACT AATATATCCA CTCGCTCTAA TCCGACCCAA ACCCGAGTTC 
TTGAACCTTG AAACCTTTTA AACAATTAGA GGTTTAGGGG GTACGTAAAC 
TTAAAACGTA GCTCAATATT AGATATTATT GTATTCGCGG GGGAATGAAT 
ATAAGCAAAG CATGAAGCAT CTTTTTGTTT TCCTTTTCTA AGCAAAGCAT 
GAAGCACCGC ATTTTACATA TAAGAAAGTG TCAATTGATA GGAAACTGAT 
AAACAATTGA ACAAGTACAT GATGTCGGTC CACCGCGTAG GAAGAGCTGA 
TCACTCATGT TTCTATCTTA ATTATC

AT1G74340.1

Model type: Protein coding
Short Description: dolichol phosphate-mannose biosynthesis regulatory protein-related
Computational Description: dolichol phosphate-mannose biosynthesis regulatory protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: macromolecule biosynthetic process; LOCATED IN: integral to endoplasmic reticulum membrane, endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dolichol phosphate-mannose biosynthesis regulatory (InterPro:IPR009914); Has 224 Blast hits to 224 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 93; Fungi - 78; Plants - 25; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G11120.1

Model type: Protein coding
Short Description: Ribosomal protein L41 family
Computational Description: Ribosomal protein L41 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L41 (InterPro:IPR007836); Has 185 Blast hits to 185 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 88; Fungi - 40; Plants - 48; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G11130.1

Model type: Protein coding
Short Description: Clathrin, heavy chain
Computational Description: Clathrin, heavy chain; FUNCTIONS IN: structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin, heavy chain (InterPro:IPR016341), Clathrin, heavy chain, linker/propeller domain (InterPro:IPR016025), Tetratricopeptide-like helical (InterPro:IPR011990), Clathrin, heavy chain, propeller, N-terminal (InterPro:IPR001473), Clathrin, heavy chain, linker, core motif (InterPro:IPR015348), Clathrin, heavy chain, propeller repeat (InterPro:IPR022365), Armadillo-type fold (InterPro:IPR016024), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); BEST Arabidopsis thaliana protein match is: Clathrin, heavy chain (TAIR:AT3G08530.1); Has 1621 Blast hits to 1503 proteins in 495 species: Archae - 0; Bacteria - 35; Metazoa - 935; Fungi - 178; Plants - 133; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink).
Link: InterPro Scan - TAIR