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GT17015

CSHL Arabidopsis genetrap mutant lines

Original: GT17015

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17015

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4658394 [Map]; Strand: c
      • AT3G14060.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -793; Region: promoter
      • AT3G14067.1 - [+] show detail - Subtilase family protein
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT17015 - 5-prime edge 
    TTTCCTCCTA CTTTCTCCCT GCAGGGATCA GTTCAGTCCT TCTGATTGAT 
    CATTGAAATT GGGCTCTGGT TGTATGTTTT CATTAAAAAG AAAAAAGTCC 
    TGTCGGGTTT GTTAAAAGGG CCATGTTGTT AATGGGCCGA TCTGTATACT 
    CATTAATGAG CCCTCACTCT TGGGTTAGAC CACTATGCAT GGGGTGTGAA 
    TGAGCAGAAA ATCCAATTGG CATTTGTAAA CTTTTAGATT CTTGTTTGAT 
    TTCAATTTGA CAATATGCTA TATTTGGATC ACTATAAGTT AAATGCGGAC 
    TGTGAAGCCA CGTTGATGTC ATGGTTATCA AATGCGAAAA ACCTTGTTTT 
    TTACCATAAA CGTTTTGTGT TTATAAGAGC AAAAAGGTGA ATTATGCAGT 
    CAATTAAAAT GTCAAAAAGT TTGATGAGAG AAAATTTGTG TATATAAGAG 
    CAAAAAAGTA CTATAGCATT AGTCAACATC AAAGCAGAAA TAAATAAATG 
    AAATAAACAC AAGCCGACCA TTAATTAACG CACACACAGA CTATTCAGAA 
    GTCAAGAAAC ATATCATTTT CGGGTGAATG GTTTTCACTA CAACTTATAA 
    AAACCGAACT AAAGTGGACT TTCTATGTAA TATATAGACA AAATGGGTCC 
    CTTGAGCTAC GTAATTTTGT GTCGTCTTCT ACAGCAAGAC ATACAATGGC 
    TTACTCTTTT GTCTAAGCTT ATCTACTTAC TGGCCTTCTT CATTATTCAC 
    TTCACGGAAA TTACGTAATA TGTCATATTT AGTCATAAAG T

AT3G14060.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G14067.1

Model type
Protein coding
Short Description
Subtilase family protein
Computational Description
Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast, plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 8271 Blast hits to 7174 proteins in 1143 species: Archae - 230; Bacteria - 4646; Metazoa - 71; Fungi - 664; Plants - 1990; Viruses - 0; Other Eukaryotes - 670 (source: NCBI BLink).
Link
InterPro Scan - TAIR