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GT17027

CSHL Arabidopsis genetrap mutant lines

Original: GT17027

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17027

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28543693 [Map]; Strand: w
      • AT1G76060.1 - [+] show detail - LYR family of Fe/S cluster biogenesis protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17027 - 3-prime edge 
    CGTTTTCATC CCTACCGTGG AGGAGCTTCT CGAAAGACAT CTAGCGAAGA 
    AAGAGAAACC AATAATCGAT CACGATGAGG CTGAGTTTCT GAATAGACGG 
    CGTCTGACGA GCACGCGCCG GGAAGCGTTG AGTTTGTACA GAGACATATT 
    ACGAGCGACT CGGTTCTTCA CGTGGATTGA TTCCAGGGGA AATTTATGGA 
    GGGACGTGTT GAGAGAGAAC GCGAGGAAGG AGTTTGAAGC GGCGCGATTT 
    GAGACGGATC CGGAGGTTAT CACAAGGCTT CTGATAGGTG GAAGCGACGC 
    CGTTTCGTCT GCTTTAGATA AGCTTGCGGA GAAGCAAAGA GAGATGATTG 
    AGAAACAACG CCGTGGTGAT CAACGCTGAT TTGACGGATC ATAGGGCATG 
    AATGTTTCAA CAGAATGATT CATCGAGTTT AAAGTGGTTG GTGTTTGAAA 
    TTCTTGCTGT AAAATGGTTG CCAGAAGAAG AAGCGAGATC ATTTAGAAAC 
    GTGCTTACAG AATTTTGGGT TTGATGTTTG AGTGTTGTAA TTCACTTGCA 
    CAACTTACAC ACTTCGTTTC TGAAATTATC ATTCATCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28543780 [Map]; Strand: w
      • AT1G76060.1 - [+] show detail - LYR family of Fe/S cluster biogenesis protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17027 - 5-prime edge 
    ATCCTACTTC TCCCTGCTCA CGGTATCTGG ACCTTCGTGC AGGAACAGCC 
    TCGTCGACAC AGCGCCGCTC CGATTCATCA GATCTAGACG ACCTGCCAGA 
    TTTCGCCATT TCTGAAGCTT CGCAGCCATC ATCTCTCTCA AACAACAACA 
    TTGAAAATTT TCGATCCTGG TGACAACAAC AACAATGCTT GATAACATAC 
    TGGGCTTCGA TTTCTGAAAC TGTATAAGCC CAGTTAAAGC CCAATATAAT 
    CATTAAGTTC GCAAATGATC TACTTCTCTA ATAAGACGAC GACGGATTTA 
    GATAAAATTT GAGCCCAAAA CGCACCACCA CTCAGCGTTT TAGACCTGTC 
    TTCTCCAGAG GCAGAGAAGG AGAAGCTTCC TCATATGGCG TTCATCTCAC 
    TCG

AT1G76060.1

Model type
Protein coding
Short Description
LYR family of Fe/S cluster biogenesis protein
Curator Summary
mutant has Embryo defect
Computational Description
EMBRYO DEFECTIVE 1793 (EMB1793); FUNCTIONS IN: catalytic activity; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 47 Blast hits to 47 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR