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GT17028

CSHL Arabidopsis genetrap mutant lines

Original: GT17028

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17028

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28599241 [Map]; Strand: w
      • AT1G76220.1 - [+] show detail - Arabidopsis protein of unknown function (DUF241)
        Distance: -941; Region: promoter
    Flanking Genome Sequence: GT17028 - 5-prime edge 
    CCTACTTTCT CCCTGACCTG GATGTGTTTT TATAAACTTC ATGGTATATC 
    ATAACATTCC ATATACATCT ATTGTTATTG TATAACTTAC AAAAAAAAAT 
    AGGGCCTTTT TAACCCAAAA TAATAATATT CTTTTTTTTA CCTAGGGGTT 
    TTCCCCCCTT CCTTTTTTTT AAAAATTGGT ATTTTAAAAA CCAATTATTA 
    AATTAGGCCC GGATTTTGCA TTCCTAAGGA TGGGGTTTCT GGCTGAGTTA 
    ATTAGGGGGT TAATATATCA AATTTAAAAT TTTTGGTTCT TGAAAACTAA 
    CCTAATTTTG GTTTAGTTGA AACAAACTAC AATTCATAGA TCATTCTGGC 
    TATCGTTTTT ATCCCATAAT ATTAAGGGAT CGAAAAAAAT TGTTTTAAAA 
    CGATCAAAGT ATATGAATGG CTTTTATTAT TTATTTGGCC CTTTGGGGAA 
    ATTTTTTTTT TTCCCCACCG GCCCTATTCC AGGGAAAAAG GAATTCTAAA 
    AAAGGACCCC TTGTCCACCA AATTTTTTCC AATTTTGAGT AATTGGGGAT 
    TTTCTTGATA AGAATTTGAG CCTCCAGGAT AGGTGGATAC CCAATCCTCC 
    AGGGAAAAGG AATTCTCCAA AAGGGAACCT CTTGTCCGAC AAAAA

AT1G76220.1

Model type
Protein coding
Short Description
Arabidopsis protein of unknown function (DUF241)
Computational Description
Arabidopsis protein of unknown function (DUF241); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35690.1); Has 446 Blast hits to 436 proteins in 35 species: Archae - 3; Bacteria - 10; Metazoa - 14; Fungi - 2; Plants - 400; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link
InterPro Scan - TAIR