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GT17034

CSHL Arabidopsis genetrap mutant lines

Original: GT17034

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17034

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17205622 [Map]; Strand: w
      • AT1G46120.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT17034 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TACCTCCTTG TTCTTCTTTT 
    TCTTTNGATG CCGCATACAC TTCATCTCTC TCGACTATCC AACGAATTGG 
    AAAACTTCTA TCCATCATCT TGATGTCCAA GATCTTCTTT CCTTTTAAAT 
    CTTGAATCAC ACACTTGTTG TCTTCAAAGA TGACTCGATA TCCGTTGGAT 
    ATCATTTGAG AGACACTAAG CAAATTTCTT GCTAGTTCGG GTACATAAAA 
    TACATCTTTG ATGACATGAT CTCCTTTGTT TGTGGATACT CTTATATCTC 
    CTCTGCCTTC AGACACCACC TTTCGACCAT TACCAATCCT TATGGTAATT 
    TTCTTGTTGC GGTCCAAAGT GATGAAGTGT CTAACATCTT TAGACATGTG 
    ATTGGTACAT CCGCTATCTA CCAACCACGT TTCTTCTCCA ATTGTTGAGA 
    TCTCTTTTTC TTCAACAGCA CTAAAGAGCA TATGACACTC ATCTTCTTCT 
    TCATCTTCTG ATTCTTCACT ACTTAGATGT GCTCTTTCAC CTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12145162 [Map]; Strand: c
      • AT4G23205.1 - [+] show detail - other RNA
        Distance: -204; Region: promoter
    Flanking Genome Sequence: GT17034 - 5-prime edge 
    TGCTCTTTAT ATTTCTCATT GTAACATTGG TTTGTCGTAT TGAAGATTTC 
    TGATACGATT ATACGAATGA CTTCAAAATT TTATAAACAT ACCAATTCAT 
    CATGAATTCA TGTATAGTAG TAACGCAAAT GTGGTTATGC ATGTAAAAAA 
    GCTCTGTAAA TTAGACGGAT TCGGTTTGGC TTTACCGGTA GACGAATTTC 
    TACGAATATT TACCCAAACC GGTTTATTTA CTAAACCTAT ACCATATGAA 
    CCGGAAACCA AACGCTATTA CCGATATTTT CTTCATCTCA CTCGAC

AT1G46120.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.6e-32 P-value blast match to gb|AAO73527.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)
Link
InterPro Scan - TAIR

AT4G23205.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Unknown gene
Link
InterPro Scan - TAIR