1. Home
  2. Mutant Lines
  3. GT17051

GT17051

CSHL Arabidopsis genetrap mutant lines

Original: GT17051

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17051

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 100645 [Map]; Strand: w
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: -4; Region: promoter
    Flanking Genome Sequence: GT17051 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TATTCTTGCT 
    GCATATACTA CCTTGAATCT CATCTCTTTC TTCTTCTTTA TATGGATGGA 
    GAAGAAGAAG ACATGACACG AGCCACGTGT TGTGGGACCC ATTATTTAGC 
    TTTTTGTTAT GCCCTATCAC TTTCAGTCCT ATTCGTTTTT TCCCATCTTC 
    ATACTTTTCG CCCCGCTATT TGCATTTTAT GATGAATATG ACCCAGAACA 
    TATCACTTTT CTTTATTCTC ACCCACATTT TCGGTTTATT GGAAAGAGAT 
    ACTAGAGTCA AAATTGAATG ACTCTACAAT GTTGTAGGAT GCTGATTTGA 
    TATCTCTATC TAACCTCCTT TCTATCTCCA AAGACCAAAC AAAATTTTAC 
    ACAGGCCTTC AATCCTTGAG CTTTACAACC TAAAGAAGAA AAACACTGAA 
    TCATCATAAT GATCTTTCAT GATCGCATCT ATTCATCTCG CTCAACCATG 
    TACACAAAAG ATGTGGAGAG ATGATTCTGA TTTGTGAAAA GGGAAAATCA 
    TGGACTTTAG ACTTGAAAGT AAAGAAATCA TCCGGAACTT CTCTCATCAA 
    ACGAGGATGG AGAAGTTTCT GTAGTGCCAA TGGACTAAGA GCTGGAAGTA 
    TCATAACTCT CAAACTGAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 100741 [Map]; Strand: w
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17051 - 5-prime edge 
    CTATGAAACC AAACAATCTC TAAAACCATA TCAATGGGAC TACATAGGAC 
    AGCTCTCCGA CGTGTCATCA GATTCGATCC CACTGATGCT ACTGGCTCTC 
    CTCGCAACTT TCTTCAGACA CGTCCGGTCT CTTCTCCTCT TCCCTTCTTC 
    TGCCCCCGTT GTTGTTGTCA CTTCAAACCT CAGCGTCCTC GACGACCAGC 
    TCAACCTAAA TCGGCTCTTC TCGT

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR