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GT17057

CSHL Arabidopsis genetrap mutant lines

Original: GT17057

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17057

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3644829 [Map]; Strand: c
      • AT5G11420.1 - [+] show detail - Protein of unknown function, DUF642
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT17057 - 5-prime edge 
    TTTTTTGTCA AAATGTCTCG TCAGGGACTT TGGATAGAAA CTCAACAGAA 
    TTAAGCTTCG ATTCGCTAAA ACAGAATTTA GGTTTTAAAG AAAAATGTCA 
    CTGAAAATGC AAAATCATAT ATATACGCTT AAACATGATT AAGTACGTCT 
    ATGTATGTGA TGATGATTAC CGTCACTGAA GCAAATGACG GAAGTGATGG 
    TGGCGATTAG GAGAACGAAG AGAAACGAGA GGCTGCCTCC TTTCATCTCA 
    CTCGA

AT5G11420.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF642
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G25460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR