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GT17058

CSHL Arabidopsis genetrap mutant lines

Original: GT17058

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17058

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3253027 [Map]; Strand: w
      • AT5G10336.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -962; Region: promoter
      • AT5G10340.1 - [+] show detail - F-box family protein
        Distance: -95; Region: promoter
    Flanking Genome Sequence: GT17058 - 3-prime edge 
    GAAACGGTAG AGGTTTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAA 
    TGGAGCCTAA GTCCATATGT AAACTTGTTG ATGAAGCCCA TTAAAACTGA 
    AACTTGACTA ATTCGGGTCG GACTCAAATC AAAAACATAC AGTATGTTGA 
    AAAAGATGAA GTGAAGACAA TGGTTGGTTC CTATAATCCA TAACGTAGGT 
    TTATCTTGGT TCAATTTTCA ACTTTAATTT CTTATACATA AACCGACAAC 
    AATTTTTTTA GTAAAAGTTT TTTTTTTTCT TTCAAAGGGA AAAACAAAAC 
    TTCTCAAATC TTTTACAAAA TATTTTTATA TCATTTTAAA ACTTTGGCTC 
    ATGCATAGGG CAGGTAAAGC CCTTCCGGTT TTATTAAATA ATTAAACCAA 
    CCTGGATTCT TTAAAAAAAG GTTGCCTTCT TCCCCCCCCC CCAAAAATAA 
    AATAAAAAAG CTAAATGCCT TAACCCAGTT ATAAGGAAAA AAAAATTTTT 
    GGCCTCCCCC ATTTGTTAAA AAGGTCCCCG GATTGCCCCG GTTGTAAGCT 
    TTCCAGGAAA TCAAACTCCC CTTCGATCCA ATATCTCATC CAAAAATT

AT5G10336.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10340.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR