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GT17067

CSHL Arabidopsis genetrap mutant lines

Original: GT17067

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17067

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 618151 [Map]; Strand: c
      • AT2G02340.1 - [+] show detail - phloem protein 2-B8
        Distance: -877; Region: promoter
      • AT2G02350.1 - [+] show detail - SKP1 interacting partner 3
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT17067 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTCCATCCA 
    CCCATCTTCT CTCAACTCTG GTTTCGCCAC CACTTTCCTC TTTCGAGACT 
    GCCCCTTCCC ATGCGTATCA AAGCATATGA AACTTCTAAA AGACTCCTCT 
    CCCACTATCC CAACTACAGC CTCTATAGAC ACACCCTTAA AGCCACACCA 
    ATTATCCGCT TTCTTGAACA CAATGTAGAC CGAGTAACGA GTTCTTGGAG 
    AAAGGACACG AGTATTCATT CTGCAATTAA ACTCAAACCT ATATGCTTCG 
    CGAAGCGCCG CTACTGTTTC AAACCTGCAT ATCAGTATAT CACTTGGCAA 
    CATAATTATA TGATCGGATT GAGTTGAAAT AACACAAAGA TAATGAAAAA 
    GGAGTACATA CCTAGATTCT GGACATGGAA TCCATAGGAA ACGCTGAGAC 
    ATATCTGCCA TGCTTGATAG AT

AT2G02340.1

Model type
Protein coding
Short Description
phloem protein 2-B8
Computational Description
phloem protein 2-B8 (PP2-B8); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B7 (TAIR:AT2G02320.1); Has 560 Blast hits to 546 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 560; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02350.1

Model type
Protein coding
Short Description
SKP1 interacting partner 3
Curator Summary
encodes a protein containing an F-box domain and physically interacts with SCF subunit SKP1/ASK1. The protein also exhibits similarity in sequence to phloem protein 2 (PP2) from cucumber.
Computational Description
SKP1 interacting partner 3 (SKIP3); BEST Arabidopsis thaliana protein match is: phloem protein 2-B10 (TAIR:AT2G02360.1); Has 311 Blast hits to 302 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 311; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR