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GT17096

CSHL Arabidopsis genetrap mutant lines

Original: GT17096

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17096

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7391535 [Map]; Strand: w
      • AT2G17000.1 - [+] show detail - Mechanosensitive ion channel family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17096 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGCTGGA 
    TCGGGACATC GGATCAGTTA AGATCAGGTT TACTTGGGAG ACACTCTGAT 
    GATATTGATG AAGAAGATGA TTCTTCGGCT GAAGAAGATG TTCCAGTGGA 
    ATATCGAAAG TTGAAAATGG ACGCGATAAC GTTGCTTCAA TGGATGAGCT 
    TAATCGCACT CGTAGTGGCG TTAGTGTTGA GTCTAGCGCT TCATACTTGG 
    AGAAATGCTA CTCTATGGAG CCTTCATCTG TGGAAATGGG AAGTGGTCTT 
    GCTGGTTCTC ATCTGCGGGA GGCTGGTTTC GGGATGCGGA ATACGAATCA 
    TCGTCTTCTT TATCGAAAGA AACTTCCTAT TGAGGAAACG GGTTCTTTAC 
    TTCGTATACG GTGTGAAGAC TGCTGTTCAG AACTGTCTCT GGCTTGGCCT 
    CGTGCTCGTC GCTTGGCATT TCTTGTTCGA CAAGAAAGTA GAAAGGGAAA 
    CACAAAGCGA CGTTCTTCTT CTCGTATCAA AAATATTAGT GTGTTTCTTG 
    TTGAGCACGG TCTTATGGCT GATCAAGAGT TCAAGACACT GGTGGTGAAA 
    GTTTTAGCAT CTTCGTTCCA CGTTAGTACC TACTTTGATC GGATTCAAAA 
    AGCTCTGT

AT2G17000.1

Model type
Protein coding
Short Description
Mechanosensitive ion channel family protein
Computational Description
Mechanosensitive ion channel family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 6 (TAIR:AT1G78610.1); Has 1986 Blast hits to 1976 proteins in 685 species: Archae - 66; Bacteria - 1304; Metazoa - 0; Fungi - 206; Plants - 211; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink).
Link
InterPro Scan - TAIR