1. Home
  2. Mutant Lines
  3. GT17114

GT17114

CSHL Arabidopsis genetrap mutant lines

Original: GT17114

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17114

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 301748 [Map]; Strand: w
      • AT5G01770.1 - [+] show detail - HEAT repeat ;WD domain, G-beta repeat protein protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17114 - 3-prime edge 
    AATTCGCTTT CTCATTGTTC AATTTGGATG GCATTAGGGG ACTTGATGGT 
    CTCCAGGCTC TCTCAATCTT CCGTTACTGT TGTCACCAAT CACCTCTACG 
    ACGACGACGA CTACTGCGCC TCCTCCGCTC ACGATGATTC CCGTGTGTCC 
    ATCATCGCCT CTCCCAGAGT CGCAAGTAGC AACTATGAGA ACCTCTCCGC 
    CGCCACAAGC ATGGCATACT TGCCTCAGAC TCTTGTGCTC TGTGACCTTA 
    GACACGACGA CGCATCCGAC ATCGTCCAAC CCCCAAGATG GCGCCTTAAA 
    GAGCGAGTTA GTTTCTCCTC CCAATCTATT TTGTTGCCAC TAGATTGTGT 
    ACTCTTCATG CCCACTCTCT AACAATGGCA GATGAAAACA GGATGTGTTG 
    CTCTAGTTAT GTGTTTGCAC ATTACTGTTG ATCCCCCTGA TGTTATTAAG 
    ATTTCTCCCT GCGCAAGACT CGAATGCTGG ATAGGTCCCA ACTTTCACTT 
    AACTCTCATC TTCTTCTTTT TTTATTTCAA TGTTTCCCGC AATCATTTTT 
    CCCTTCTTTT GTTTTGATCT CAGAGATCCT TTTTCTATGT TTCCCCCAAG 
    AAGAGCTCTT GAGGCTATTG GCCAAAACTT GAGCATTCAG TACGAGAGAT 
    GGCTGCCTCG GGTGATTACT TCATTTCCAG CTCCTTCCTT TGTTGAATGT 
    TTGGCTTCCT CTTCATTTGT ATTCTATGGT TTATTTTCAG GCTCGATATA 
    AAGTCGAATT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 301873 [Map]; Strand: w
      • AT5G01770.1 - [+] show detail - HEAT repeat ;WD domain, G-beta repeat protein protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT17114 - 5-prime edge 
    TCCTACTTTC TCCCTGGTTG TGCACTGCAG GGAGAATGAG CGGATGACGA 
    AGAGATAATC CGGTAAGGAC GGAGAGGAGC GAAGCGGAAG CCCTAGGAAC 
    ACCGGAGAAG ATGAAGAGTT AGATGGTGGT GCACAAAGAG AGAAATGTGG 
    AGAAATGCCA AATTTTGGGA TTTTGTCGTC AGCAGCAAAA AAAAAAAAAA 
    AAAAAAAAAA AAAAAAAAAA AAAACCGGGG GGCCCCCCAA AGGGGGGGGG 
    GTTTTCCCCC CCCCCCCCCT TTTTCTTTTT TTTTTTTTTT TTAAAGGGGG 
    GGGAAAAATT CCCCCCCCGG GGAAAAAAAA AAAATTTTTT TTTTTTTTTT 
    CCCCCAAATT TTGGGAAAAA AAAGGGGCCC CCCCTTTTTT TTTTTTTCCC 
    CCCCAAACCC CAAAAAATTT TCCCCCCTTT TTTCTCTCCC CCTAAAAAAG 
    AAGGGGGGTT TTTTTTTTTT TTAAAAAAAA AAAAAAAAAA AAACCCCCCC 
    AAGGGGGGGT TTTTTTTTTT TTTAAAAAAT TTTTTTTTTT T

AT5G01770.1

Model type
Protein coding
Short Description
HEAT repeat ;WD domain, G-beta repeat protein protein
Curator Summary
Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutations in this gene have no visible effects on embryo or plant development.
Computational Description
RAPTOR2 (RAPTOR2); FUNCTIONS IN: binding, nucleotide binding; INVOLVED IN: cell growth; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT3G08850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR