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GT17137

CSHL Arabidopsis genetrap mutant lines

Original: GT17137

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17137

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 91320 [Map]; Strand: c
      • AT4G00220.1 - [+] show detail - Lateral organ boundaries (LOB) domain family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT17137 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACAAGCA TCATTTTTTT 
    TTTGGGTTAA CCTTTAAATG GCAATATCCA TATTTGGCCC CCCCTTCCCC
    GAGATATTTC CAACCGTAGG CAATTGCTTT CTAAAAATGG AGGTTGGGGA
    AGGATTTTTC CAATATTCCA GGCAAGCTTT TTTTTATAGG TTAGGACCAA
    GGCCTTTGGG GTAAAAATAA AATGGTTTTA TCCACCAAAT ATTTTTCAAA
    ATCGGGGGCC TGGATGGACC AATAACCCCG GCCGGGTTTT TTGGGCATTA
    TGGAACCAAC AACTTTTGCT CAAATTCGAA AACTCTTCCA ATTTTTAAAG
    ATGGCGAAAA

AT4G00220.1

Model type
Protein coding
Short Description
Lateral organ boundaries (LOB) domain family protein
Curator Summary
Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves.
Computational Description
JAGGED LATERAL ORGANS (JLO); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 18 (TAIR:AT2G45420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR