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Mutant Lines
GT17157

GT17157

CSHL Arabidopsis genetrap mutant lines

Original: GT17157

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17157

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 5; Position: 1470462 [Map]; Strand: c
- AT5G04980.1 - [+] show detail - DNAse I-like superfamily protein
  Distance: 0; Region: exon1 (CDS)
- AT5G04980.2 - [+] show detail - DNAse I-like superfamily protein
  Distance: 0; Region: exon2 (CDS)

AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC AGGGCTTAAG 
GATTGGATTT GCTGAGTAGG CATTGAAGAT CTGAGATTGC TTGAAGCTAA 
AAGAGATTCA ACTACTATCT CGGATTGAGA CCCTGCAAAA ATTTTTTAAA 
AAGAGCCAAG AAATAGCTGC AATATATGAG ACAGAGACGA CAAAATTCTG 
AAGATAAACA GAGACACACA TGTAGATATA TACACAGAGG GACATACTAT 
TAAATATATA GAGTGGATCC GACATGTTTT GTTCTAAGAG TTAAAGCGAC 
TTTCTTTAGA TGGTTCTCGT GGTATGAGGG AGAATTCAAG AGCTTTCTTC 
TTCAGATTTG GTCTTCGAAC ACTAAGGAAT TAACAAACTG TAGCGGAAAG 
GAATTATTAT TGTTTTTACC TTATGCAATG CTTCGGTCTT CTCTTCGTTT 
TTCTTATATT TTTTTTTTAA AAAAAAAAAG ATTTTTTTGA GTTTGGGAGG 
CAAAGTTAAG AAAGAAGTAA AATATTTGAA

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 167760 [Map]; Strand: c
  - AT2G01350.1 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -501; Region: promoter
  - AT2G01350.2 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -513; Region: promoter
  - AT2G01350.3 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -507; Region: promoter
  - AT2G01350.4 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -513; Region: promoter
  - AT2G01360.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein
    Distance: -237; Region: promoter
Flanking Genome Sequence: GT17157 - 5-prime edge
```
CCTAGCAAAT ATTCTGAAAG TGTAACTGCG CGACTGATAG TTGCATCAAT 
AGTGTGACAA GAAGCCATAA ATGTTTGATC AGAGGTGTAC CATACGGGTA 
CCTGCATAGT TGGAGTAAAC AATTGAAAGA TGAATTTAGC CAAGCAGGAA 
TAACAAACAG TTTAAAATTT TGTAATCGAT CCAGGGAGTG TATTTACTCA 
AAGAACAGAT CAAGGACTCT TCTAATAGCT CCTGAGCTAG CTAGTTCTTT 
TCCTATTGCT TCGCTTCGAG TTTTCAGTAA GACGTGAATG AACTCCACAA 
TCTAAGACAA GCCATCAGCA GCACAGACGA AATCAGAAAT ATGTTACACA 
ACAGATAACA CACTCTAGAC ACAAGAGTAT ATGTTTTGAG TTAGAACTCC 
GGACTTGGTA CATGGTTGAG TGTTAAGCTT TATGTTGAAT TTAACTAAGA 
TG
```

AT2G01350.1

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5853 Blast hits to 5853 proteins in 1914 species: Archae - 184; Bacteria - 3582; Metazoa - 59; Fungi - 129; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01350.2

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01350.3

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5825 Blast hits to 5825 proteins in 1916 species: Archae - 184; Bacteria - 3588; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1813 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01350.4

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01360.1

Model type: Protein coding
Short Description: pentatricopeptide (PPR) repeat-containing protein
Computational Description: pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G01390.1); Has 425 Blast hits to 414 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G04980.1

Model type: Protein coding
Short Description: DNAse I-like superfamily protein
Computational Description: DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT5G65090.1); Has 2295 Blast hits to 2058 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 744; Fungi - 561; Plants - 687; Viruses - 0; Other Eukaryotes - 303 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G04980.2

Model type: Protein coding
Short Description: DNAse I-like superfamily protein
Computational Description: DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT5G65090.1); Has 2300 Blast hits to 2056 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 750; Fungi - 552; Plants - 689; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink).
Link: InterPro Scan - TAIR