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GT17160

CSHL Arabidopsis genetrap mutant lines

Original: GT17160

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17160

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19280951 [Map]; Strand: c
      • AT2G46920.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: 0; Region: exon2 (5UTR)
      • AT2G46920.2 - [+] show detail - Protein phosphatase 2C family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT17160 - 3-prime edge 
    ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAACTAC AAACACCTTG 
    GAGGCACAAT CTCATCATAA ACCTCTAAAG AGTTTCCGCA ATTTCCAGCA 
    CCACAACACT TAACAAGAGG CGAAATTCTT ATAAAGCCTA CAAAGATTCG 
    ACGCGTTATG CAGAATCCAA GCATCATCTG AAGCTCAATC TCTGAACATT 
    AAAACGCAAA CAAGCACCTG ATAGTATCAA ATTCGGATTT TTTAAAAAAT 
    CAGCTGAATG CCCACAAAAG CTTTGGATTC TGAGGTCTTG AAATGGAAAC 
    AGAAACAGTG ATCTGACCTG TTGAAGAAGG AGATGGATCA TCAAGCAGAA 
    ACTGGAAACA GATCTAAAGG AGCGGCAAAG AGAAGACAGT GTTGTATTGA 
    ACACATCGGA AGCAAAATAG AGACAGTAAA CAAGGGGAAA AAACACCCCT 
    TTAGATTTCT TCTATGGGAA TCTGACAAAA AGTACCCATT TTTAAAAACT 
    AATTATACAA AAACAAAAAA AA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19280886 [Map]; Strand: c
      • AT2G46920.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: 0; Region: exon2 (CDS)
      • AT2G46920.2 - [+] show detail - Protein phosphatase 2C family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17160 - 5-prime edge 
    TCCTACTTTC TCCCTGTTTG TAGTATTGCC TGAGTGATGG GAAGCGGGAC 
    TTCCCGTGTT GTTGGTTGTT TCGTGCCGTC TAATGACAAA AACGGTGTTG 
    ATTTGGAGTT TCTGGAACCT TTAGATGAAG GTTTAGGCCA TTCCTTTTGC 
    TACGTTAGGC CAAGCATCTT TGAGTCTCCT GATATTACTC CGTCTAACTC 
    GGAGAGGTTC ACCATTGATT CAAGCACTAT TGATTCTGAG ACACTCACTG 
    GGTCTTTTCG AAACGATATC GTTGATGATC CTTCTTTCTT GAATAGACAC 
    AACAGTAAAG GTTTGGCGGA AACTACGTTT AAGGCAATCT CAGGTGCTTC 
    GGTTAGTGCC AATGTTTCCA CGGCTAGGAC TGGGAATCAA ATGGCATTGT 
    AGTCAAGTGA CGTTTTGGAG CCTGCTGCTT CATTTG

AT2G46920.1

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Curator Summary
Pol mutations are recessive, partial suppressors of meristem defects in strong clv1 and clv3 mutants, and nearly complete suppressors of weak clv1 mutants. Single mutants appear normal. Acts downstream of the CLV signaling pathway in meristem development and is required together with PLL1 for stem-cell maintenance through the regulation of WUS.
Computational Description
poltergeist (POL); FUNCTIONS IN: phospholipid binding, protein serine/threonine phosphatase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 1 (TAIR:AT2G35350.1); Has 1941 Blast hits to 1802 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 375; Fungi - 295; Plants - 1017; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G46920.2

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Curator Summary
Pol mutations are recessive, partial suppressors of meristem defects in strong clv1 and clv3 mutants, and nearly complete suppressors of weak clv1 mutants. Single mutants appear normal. Acts downstream of the CLV signaling pathway in meristem development and is required together with PLL1 for stem-cell maintenance through the regulation of WUS.
Computational Description
poltergeist (POL); FUNCTIONS IN: phospholipid binding, protein serine/threonine phosphatase activity; INVOLVED IN: protein myristoylation, regulation of meristem structural organization, protein palmitoylation, regulation of transcription, maintenance of meristem identity; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 1 (TAIR:AT2G35350.1); Has 1941 Blast hits to 1802 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 375; Fungi - 295; Plants - 1017; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink).
Link
InterPro Scan - TAIR