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GT17179

CSHL Arabidopsis genetrap mutant lines

Original: GT17179

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17179

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 104679 [Map]; Strand: c
      • AT4G00238.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17179 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACAGGAG 
    AGAGATCTCG TCTTCTTCAC TCCATACTCT CTGAGCATGC CCCTTTTTGT 
    TATCGCCCTC TTTCTTAATT CTTTTGACAT GCATGTCCCT TGACGTGGTT 
    CCTTCGCTAG CTCGCTTCTT CCCTGACTTC ACCGCCGGTG ATTCAGTAGC 
    ACCTTCGTTA TTCCCTGACT TCACTGCCGG TGATTCAGCA GCACCTTCTT 
    TCTTCCCTGA CTTCACTGCC GGTGATTCAG CAGCACCTTC TTTCTTCTTC 
    CGCCTGGTTA AGACGAATGA CTGCTTCTCT GACTCTGAGT CATCAGAAAC 
    TGCCACGGCG GCGGAAGGAG AGTTTAGGGT TTTTGTTGAC GGAACAGTGA 
    CGGGAGCTTC TTTGGGTTTG CTTTCTTTAG AAGAAGAGAT CTCTTCAGAA 
    GAACTCTCAA ATTCGCTTGA AGAATCGATT GCTGGATTTT CCAAAGAAGC 
    CATTGGATTT TTTTCGGTAT GATGAAGAAG AGTGAGTGAG AGAGTTACTT 
    TTTTTAGGGT TAGTGAGCGG CGAGACTTTT TTTCCTTTAA CGCTGAACAT 
    TCTTCACTCT CTTTTATATT TAACAAACAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 104628 [Map]; Strand: c
      • AT4G00238.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17179 - 5-prime edge 
    TTCCATCCTA CTTTCTCCCT GCTCTCCTGC AAGCAATGAT CGATTTCAAA 
    GCTGAGACAG GTACAAGTCC TTGCGGATCA TAAGGATAGG TTTTTTGATA 
    TCGCCAAGAA ATCTATAAGC TTTGATGTTA GTAAAGTCCA GTTCTTTGAC 
    AAGATTAGAA GCTTTAAGAG AAAGTATTTT GGTGACCGGA AGGTGAGAAG 
    TGTTGAATCG GATCATGATA AGAAGTGTTT GGGTTTGGCT GTTTCTTTTT 
    GGGGATCTGA TGGTGTGAGC CTTGAAACTC CTGTGAAGAA GAAAGTGAAA 
    GATGAATCTG TTCTTGTTAA GGCTAATAGC AAGGAGAAGA ACGTGAAACC 
    TTTGGTTAAA GAAGATGAGC AAGTCGTGAT TCTTGGAGAA GATTCAGAGT 
    GGCTTGAGGA GTCTTTTCTT GTTCCGGTTA TCGCTAGTCT CGGTTTGGAT 
    GAGTATTCTG TGAAGAAGAA GTGGAGCAAG GTGTCCGTGG AGACTAATAA 
    GAGGATTCAA GACAAGATGA ATCTTGTGGA TGCTAAGAAA TGTGAGATGT 
    TGTTGGCGAA CATGGATGTT TTGAAGGAGG TGACTTCAGT GCTTACTCAA 
    ACCGACTAAG AAGAAGAAGA GGAAGCTCTT GGATTGCATA TGTGTATCCG 
    GTTAAT

AT4G00238.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00250.1); Has 934 Blast hits to 678 proteins in 131 species: Archae - 0; Bacteria - 25; Metazoa - 209; Fungi - 135; Plants - 261; Viruses - 3; Other Eukaryotes - 301 (source: NCBI BLink).
Link
InterPro Scan - TAIR