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GT17183

CSHL Arabidopsis genetrap mutant lines

Original: GT17183

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17183

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1591788 [Map]; Strand: w
      • AT3G05490.1 - [+] show detail - ralf-like 22
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT17183 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACT TACCGTTTTC ATCCCTACAG 
    AGACACAAAA AGAAAGGGGC AAAATAGGAA ATTCAAGTGA CTCATCTTCT 
    TCAACGCCTG CACCTAGTGA TGGTGCTGCA TCCACGGCTG TAAGGATTCG 
    CCTGAGCTCC ACGCTGGCAG TTGTAGTACG ACGCACCACG CCGTGAACAA 
    GGCACACTGT TCCTCCTCAT AGCACCGTAG CTAATGTACT TCTTCTGTGC 
    TAATATACGC CGGCTTATGT CTGAATCGAA CTCCATCTCT TCTCTTCACT 
    CGACAAGNNN NGNGANCGAN CCTGNGCATC CAGAGAAGAG CGATGAAGAT 
    CCGGCTCTCA CGAAATCTAG CGAATCTCCG AAGTCTCCGG TTGATTCCAC 
    GGCTGAGATT ACTATCGCCA GGATCGCGAT GACGGCGTAG ATCGCGCGAG 
    TGTTCGTCAT CTTTAAGCCA AAACCTTCTC GGTGAATCAG AGTCTTCCTT 
    TGTTAATTTG CTTTTACTCT CTTTCTCTCT TGGAAACTTG ATTCTGTACA 
    CAGCTGAAGA CAACAGGTTA AGCGTTGGTG TGTAGCTTCT TATAACCTGA 
    GGTTTTTGTT ATAATGGGCT TGTGTATGGA TATATTAACG AAACTGCCCT 
    TGTATTT

AT3G05490.1

Model type
Protein coding
Short Description
ralf-like 22
Curator Summary
Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
Computational Description
ralf-like 22 (RALFL22); CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: ralf-like 33 (TAIR:AT4G15800.1); Has 266 Blast hits to 266 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 264; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR