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GT17189

CSHL Arabidopsis genetrap mutant lines

Original: GT17189

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17189

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 120886 [Map]; Strand: w
      • AT2G01210.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17189 - 3-prime edge 
    ACGTTACCGA CCGTTTTCAT CCTTAATTGA AGGACCTTTG CCAAGGATAT 
    CAACTTGGCC TCAATGCCTC TTACCCTTTT ATCCCAAGCA ACAACCCACC 
    TGAGGATTCT GATAGTACTA ACTCTGAAAC CAAACAGAAA TCAAGTGGTT 
    TGAGCAAAAG CGCCGTCATT GCCATTCATC CTCACTCGA

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT17189 - 5-prime edge 
    CCTACTTTCT CCCTGATTAG GTGGAGGAGG TATGATATTG GTTTGTAAAT 
    TCTTATCTT

AT2G01210.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G25320.1); Has 133812 Blast hits to 98087 proteins in 4104 species: Archae - 103; Bacteria - 11207; Metazoa - 34549; Fungi - 6957; Plants - 66297; Viruses - 188; Other Eukaryotes - 14511 (source: NCBI BLink).
Link
InterPro Scan - TAIR