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GT17190

CSHL Arabidopsis genetrap mutant lines

Original: GT17190

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17190

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT17190 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAATTGAA 
    GGACCTTTGC CAAGGATATC AGC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 136980 [Map]; Strand: c
      • AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: exon2 (CDS)
      • AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: exon2 (CDS)
      • AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT17190 - 5-prime edge 
    GCCTCTTGTT TTGAATAACA ACAAGGATCG TGTTATCCAA TACTATGTCC 
    CTTCTTTGTC AGCCATATCA AATCTATGCT CATTCTCATG CCTTGGATTC 
    TTCTCTTAAA GCTAGGTTCT TAATTCTTTG TGAACTCATC ATATCAGCAT 
    TATAGTATAA CAAGCTGTTT TTCATTATGT CATGTACGGT TCCTATGGCA 
    GGCGTCCTGG TGATAGTAGC GACAGTGATT TCCGGGATTC AAGTACTGAT 
    GTTAGCACCG ATAGTGATTC CGAGCGGGTT TCTGCTAGAG AAGACTGTAT 
    CTCATTGAGG GATCAACATC AGGAAGACTC TT

AT2G01260.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 265 Blast hits to 263 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR