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Mutant Lines
GT17215

GT17215

CSHL Arabidopsis genetrap mutant lines

Original: GT17215

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17215

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 30307685 [Map]; Strand: c
  - AT1G80620.1 - [+] show detail - S15/NS1, RNA-binding protein
    Distance: 268; Region: intergenic
  - AT1G80630.1 - [+] show detail - RNI-like superfamily protein
    Distance: 1011; Region: intergenic
Flanking Genome Sequence: GT17215 - 3-prime edge
```
GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAAATATT 
GGGATTCAAA TTTCTAAAGT CAGCGATGGT TTATTAGAGT AGAGAGAGTG 
AACCGTTACT TCAACCCGGT AAACATATAA CCGGGATAAA GCAATTGAAT 
TTGAAACGAC ACTTGAGAGT TTATTTATTA CATCTTCTTC GACTTCCTCT 
CCTAAGAAGT AAGAACAGTC ACTCATGGCG TT
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 30307623 [Map]; Strand: c
- AT1G80620.1 - [+] show detail - S15/NS1, RNA-binding protein
  Distance: 206; Region: intergenic
- AT1G80630.1 - [+] show detail - RNI-like superfamily protein
  Distance: 1073; Region: intergenic

CTTTCTCCCT GCCATATTAA CCGGGTTGAA GTAACGGTTC ACTCCCTCTA 
CTCTAATAAA CCATCGCTGA CTTTCGAAAT TTGAATCCTA ATTTGGTAAA 
AGGCCAAAAG TAAAGCCATT GATAAAAGAC TACTAACGAT TCCGTGCACC 
TCTTTCCTCC GAATCACCTC AGTTTCTGTT CCGTAGGTGT TCACTTTTCA 
TGTTTAACAT GCACCAACCC TAAAGGTTAA AAAGGATAAA GTGGCAGTAA 
AAGATAGATG CATTGAGAAA GATAAGTTGG AGAAGTAAGT TTATTATCAC 
ATTCAAAGTA ATAAAGACAA TGTCAACGAA AGTATCCCAC AGCTTTATTC 
TCTTTTCGCC TAAACAGCCT GCAATCATAA TCTCTAGTAG AACAACTTTC 
CTCCCCAATA TGATTGATAA GAGAGACCCA CATTATCTCT TTTGCCATAA 
TGAAAAAGAA CAAAAAGAGA GTACTGAGAT CACAATTCTA TGATGTCCCT 
TGCACAAAAA TTTCAAAACT TGTAATCCGG GTTGTCACGA AGGCCGAGTT 
TTGACAGTGA AAGGCAGTAA GAATCCC

AT1G80620.1

Model type: Protein coding
Short Description: S15/NS1, RNA-binding protein
Computational Description: S15/NS1, RNA-binding protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit, ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15 (InterPro:IPR000589), Ribosomal protein S15, bacterial-type (InterPro:IPR005290), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: S15/NS1, RNA-binding protein (TAIR:AT1G15810.1); Has 7972 Blast hits to 7972 proteins in 2715 species: Archae - 0; Bacteria - 5433; Metazoa - 85; Fungi - 116; Plants - 310; Viruses - 0; Other Eukaryotes - 2028 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G80630.1

Model type: Protein coding
Short Description: RNI-like superfamily protein
Computational Description: RNI-like superfamily protein; BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR