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Mutant Lines
GT17216

GT17216

CSHL Arabidopsis genetrap mutant lines

Original: GT17216

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17216

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 18381929 [Map]; Strand: w
  - AT4G39550.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
    Distance: -24; Region: promoter
Flanking Genome Sequence: GT17216 - 3-prime edge
```
TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCTACTGTT TTCATCCAGA 
CTCAAAACCC CTAACTTTTG TCCTCTGCTG TCGGAAAAGA ATACAGAGGT 
TGATCGACGC CTATACCCGA CCGGATCGTA TCGGTATATT CATCTCACTC 
GA
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 18531700 [Map]; Strand: c
- AT4G39955.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
  Distance: 0; Region: intron2 (CDS)

CCTACTTTCT CCCTGCCCTA TCATCAATGT CGGCTGCATA TCAATGTTAC 
CAGGATTCAA ACAATGATAA TCTTTAAATT TATATAGATT TGTATGAACT 
GAGAGAGAGA TCACCTGTGT TATCTTTGGA AGATTGGCGA ATCTTCTACC 
CTTATGCAGA GCTTCCACAA GTTCTTTCCT TTCTTGAAGA TAGTCTTTAC 
ACATTACCTT GCAACAAATC CTCACAACAT CAGAATTCAA ATACTCTTTT 
CAAACGAACT ACTCTTAGTC TAGCTTACAT CAAAGAGTGA TGCTTTTGAA 
ACTAAACTAA ACAACTCAAC ACCATAATAA TCACACAAAC ATTTTGTCTG 
TAAAACTCAA AAGTATGTGG TGGGCCCATT TAAATGAAAG AATACACAAA 
AGGACTAAAC TTATTGATAC TAAGCTTCAT CGGAAGATTA TTTCATTCCA 
TCCCTAATCA ACAATAAACG AGCCTATATA TGAAAGATTC CCATTATTAA 
CATTTCACAA GCATCAATCA TCATAGAAAA ATAGAAATAG TAAGAGTGAA 
AAAAGGTGAA GACTTACATG AATGTAGTCC ATGGCAAAGC AAGAAGGGAT 
CCAAATCGGC GGTTTATAGA AAGATAACTG GAGAAGC

AT4G39550.1

Model type: Protein coding
Short Description: Galactose oxidase/kelch repeat superfamily protein
Computational Description: Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G49000.2); Has 3208 Blast hits to 2568 proteins in 139 species: Archae - 6; Bacteria - 164; Metazoa - 1656; Fungi - 7; Plants - 1275; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G39955.1

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G09430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR