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Mutant Lines
GT17230

GT17230

CSHL Arabidopsis genetrap mutant lines

Original: GT17230

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17230

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 145984 [Map]; Strand: c
- AT4G00335.1 - [+] show detail - RING-H2 finger B1A
  Distance: 0; Region: exon1 (5UTR)
- AT4G00335.3 - [+] show detail - RING-H2 finger B1A
  Distance: 0; Region: exon1 (5UTR)
- AT4G00335.2 - [+] show detail - RING-H2 finger B1A
  Distance: 0; Region: exon1 (5UTR)

AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAGTCG 
CCAGCATTTA TTCTTCACCG GAGAATCACG ACATAATCAA AATCTCCGGC 
GAAATCTCAT GTTATCTTCG TTATTGCTCT CATCGGTTAT TTATTCCATC 
TTTTTCGGTT TTCGTGTATT TTTTGTTTTT TGGTCTTTTC GGCTTCTTCA 
ATTTTAGGGT TCGCGTATTG TTTAGTGTTG TTTAGCTTCT GATTTAGATG 
TGCTTACTGT GTTCATGTGT TTGGGATTTG GCTAAATCGT GTTCATGTTG 
TTGTCTATTC TTATGAGAAG ATCTTATGGT AGAGTTACAT ATCAATGATG 
TTACCAATTT TGAAGGTTAT TGTGTTGTGT TTGATTAAAA TTGGTTGAAG 
TGTGAAATGC TTTTGCTCGA GTCACTGTTT TCATTGCAAC TTGACTGAAT 
CCTAGAGGTT GTTTTAGAAT ATAGATTCAA GTTTCAGCTA TTGATGGGAC 
ATTACACAGA GCATAAGGAA CATTCCCATA CCTTTGTGTT TCTTATGGAT 
AACTTTGGCA TCAGATCAAC TTTTTCTTTT GTCATTTTGC TTACTAACAC 
TGTAATAATC ACTTGTTATT GGGGTTTCTC AAGTCTGCTT TGA

AT4G00335.1

Model type: Protein coding
Short Description: RING-H2 finger B1A
Computational Description: RING-H2 finger B1A (RHB1A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 5425 Blast hits to 5419 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 1535; Fungi - 417; Plants - 2568; Viruses - 6; Other Eukaryotes - 899 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00335.2

Model type: Protein coding
Short Description: RING-H2 finger B1A
Computational Description: RING-H2 finger B1A (RHB1A); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00335.3

Model type: Protein coding
Short Description: RING-H2 finger B1A
Computational Description: RING-H2 finger B1A (RHB1A); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR