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GT17259

CSHL Arabidopsis genetrap mutant lines

Original: GT17259

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17259

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT17259 - 3-prime edge 
    TTAACCACTC AAAGTCCCCT CCCCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 110875 [Map]; Strand: w
      • AT4G00240.1 - [+] show detail - phospholipase D beta 2
        Distance: -157; Region: promoter
    Flanking Genome Sequence: GT17259 - 3-prime edge 
    AGCGAAGGTA AGTCTCACCT AATTCCTTGG AACTAAGCTC CGCTGTGATC 
    CGAATGTACT TATATATCTC TCTCTTCATC TCACTCGA

AT4G00240.1

Model type
Protein coding
Short Description
phospholipase D beta 2
Curator Summary
member of C2-PLD subfamily
Computational Description
phospholipase D beta 2 (PLDBETA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D, plant (InterPro:IPR011402), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D/Transphosphatidylase (InterPro:IPR001736); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2407 Blast hits to 1935 proteins in 427 species: Archae - 0; Bacteria - 522; Metazoa - 526; Fungi - 534; Plants - 642; Viruses - 3; Other Eukaryotes - 180 (source: NCBI BLink).
Link
InterPro Scan - TAIR