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GT17260

CSHL Arabidopsis genetrap mutant lines

Original: GT17260

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17260

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 110978 [Map]; Strand: w
      • AT4G00240.1 - [+] show detail - phospholipase D beta 2
        Distance: -260; Region: promoter
    Flanking Genome Sequence: GT17260 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACTTTCT 
    TCCCCCAAGC GAAGAAGCGA TGATCAAAAT TTTACAACGG TTCCTCCATT 
    TTCAGCGAAG GTAAGTCTCA CCTAATTCCT TGGAACTAAG CTCCGCTGTG 
    ATCCGAATGT ACTTATATAT CTCTCTCTTC ATGCTCACTC GACAAAGCGN 
    CATTGTTGCT TTTTTGAAAT TTAGCTTCTG ATGAAGAAAT GTTGATCGGA 
    GAAAACGTTG AAGACGTTTG AATTTCTTTA TGAATTAGTC AGTTGTGGTG 
    TTAGTTAGTT ACGATGGAGA ATTATGGTTG GAATTACCCT TATTACCCTT 
    AACGGCCTCC GCGGCATAAT CCTCCTTACC CAGCACCGCC TCATCACCAT 
    GGATCAATGT CTCATTCGGG TCCATTAGAC CACCACCACC CCTCAATGAG 
    TTACTATGCT TCTTTTGATT ACCAACA

AT4G00240.1

Model type
Protein coding
Short Description
phospholipase D beta 2
Curator Summary
member of C2-PLD subfamily
Computational Description
phospholipase D beta 2 (PLDBETA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D, plant (InterPro:IPR011402), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D/Transphosphatidylase (InterPro:IPR001736); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2407 Blast hits to 1935 proteins in 427 species: Archae - 0; Bacteria - 522; Metazoa - 526; Fungi - 534; Plants - 642; Viruses - 3; Other Eukaryotes - 180 (source: NCBI BLink).
Link
InterPro Scan - TAIR