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GT17262

CSHL Arabidopsis genetrap mutant lines

Original: GT17262

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17262

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30354307 [Map]; Strand: c
      • AT1G80770.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -808; Region: promoter
      • AT1G80770.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -808; Region: promoter
    Flanking Genome Sequence: GT17262 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC AGAAACAGGT 
    TATCGTGCAT GCTTAAAATT TATAAAGAAA AACAGTGACT ATTTTCTAAA 
    GCTATTCACA ACTCATCAGG AGTTTGATAC TCATCCTAAG ATTGCTACTG 
    AACCACACAA TTAAAGTGAG CGTGATAATA GTCGTGTCAA ACAACAAACA 
    ATTTCTCCCA ATCTTTTTAC TCCATTAATC GTTGTTCGAT CATCCGATAA 
    TCTTTTGAAT CCCTGAGCAG ATCATAACAA AAACAGAGCC GTGCGTGAAC 
    ACAAGCAAAC CATACCAACA GTCGAGAACA TGAAATATTT ATACCGCGAT 
    TAATTCTTCA CGTGCTTCAT CTCACTCGA

AT1G80770.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
pigment defective 318 (PDE318); FUNCTIONS IN: ferrous iron transmembrane transporter activity, GTP binding; INVOLVED IN: ferrous iron transport; LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), Nucleolar GTP-binding 1 (InterPro:IPR010674), Ferrous iron transport protein B, N-terminal (InterPro:IPR011619); BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G10300.1); Has 11067 Blast hits to 11052 proteins in 2859 species: Archae - 320; Bacteria - 7505; Metazoa - 379; Fungi - 348; Plants - 242; Viruses - 0; Other Eukaryotes - 2273 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80770.2

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
pigment defective 318 (PDE318); FUNCTIONS IN: GTP binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), Nucleolar GTP-binding 1 (InterPro:IPR010674); BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G10300.1).
Link
InterPro Scan - TAIR