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GT17314

CSHL Arabidopsis genetrap mutant lines

Original: GT17314

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17314

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 118560 [Map]; Strand: w
      • AT4G00270.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT17314 - 3-prime edge 
    CAAGTTCGTC CAAATCCTCC TTCAGATGCT TGGTTATATC CGCACTAAAG 
    GCCCTTGCTC TTTCATCATC CTCCCAGACG GAAGATTGGG AATCACTGCT 
    CTGCATGCGC CCTAGAATCA GCAAGTCTAA AGCAAGCAAT AAGCATGGTG 
    ACTCCGAAGC AGATCGATTT CTCTTCCTGT GTTGGTGCTG ATAACTCCAA 
    CGGTACCCTC TCCCATCGAA GATCTCCACG GAATATTCCT TCCTCAAAGC 
    GTGCTGCTTC CGTCGCAGAA GAAGAGACTA TGAAGAAGAA GATGAAGATG 
    AAGAAGAAGA AGAAGAAATT GGATCCGCCG TTGATCGTCC GGATCTGGAA 
    CGAGGAAGAT GAGCTCTCTA TCTTAAAGGT ATTGTATTGA TCTTCTCCAT 
    TTATAGTTTG ATTTGGTTTT GCATTGTGAT TTTCTAAAAC CAGATTTTCG 
    AAATTGCTCA GGGGTTAGTT GATTACAGAG CTAAGACAGG ATTCAATCCC 
    AAAATTGATT GGGATGCGTT TTGTAGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 21440 [Map]; Strand: c
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17314 - 5-prime edge 
    CCTACTTTCT CCCTAATTCT GAGCCATGGA TGAAGCAGAG GAGAAGAATT 
    TGGAAGGGAG ATGGCGATTT TCCATTGCTT CCTCTCTTTT TTTCTTTCTC 
    CAGAGGAAGA CGACGAACGG CTAATAACTT AAACCAACTC AATACCCAAC 
    CGGAAATTGG AACCGGTCTT ACTTGCTAAC CAATCAATAG GAGTCTATTT 
    AAAACGGGCC TGGGCTTGAG CCCATTGTAA ATTCTCGATG CTCTTCATCC 
    TCACTCGACA AAAAAATTGG GCCTTTTTGT CTCGGCCAAG CCTTTTTTGC 
    GTCGGCGATA CTCTTTTTCT ATTTCTCTTA GCTACAGTGA CCATCTCATC 
    TCATGTATTT GCCTTGTTGG TGTGAAAGGA ATCTCGCATT AACCAACATT 
    TGACTTTTAC TTTCTTTTTA AACCTATCAC ACACACACAC ATGCATGTGA 
    CATATGTATC ACATCATCTC AAATTTCAAC TTTTTCTTTT TCAGTTTTGA 
    CGAAAAACAA ATCAATATTA CACATTATGC ATCTGCAAAT TTTAGCTTTC 
    AACTTTTTGC ATTTTACACT ACAAATTTCA ATATATCTGC TCAACACACT 
    ATGTATTTTG AAATTTAAAT AGTTTACATT TGGTGTTAAA AAAATACATT 
    TAT

AT4G00060.1

Model type
Protein coding
Short Description
Nucleotidyltransferase family protein
Computational Description
maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00270.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT2G25650.1); Has 282 Blast hits to 277 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 255; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Link
InterPro Scan - TAIR