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GT17318

CSHL Arabidopsis genetrap mutant lines

Original: GT17318

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17318

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 39557 [Map]; Strand: w
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17318 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGGTACC GACCGTTTTC ATCCCTATTT 
    GTTGATGAAG GAGACATCAA TGACGCTGCT CTCTTGAAGA AGCTCTTTGA 
    AGTTGTTCCC TTTACCCACG TTATGCATTT GGCTGCTCAA GCTGGTGTCA 
    GGTACGCCAT GGAAAATCCT AGCTCTTATG TTCACAGTAA CATCGCTGGC 
    TTCGTCAATC TCCTTGAGGT TTGCAAATCT GCCAATCCCC AACCCGCCAT 
    TGTCTGGGCT TCCTCTAGCT CTGTCTACGG GCTCAACACT AAGGTCCCCT 
    TCTCCGAGAA AGACAGAACT GACCAACCAG CTAGTCTCTA TGCTGCTACT 
    AAGAAGGCTG GTGAAGAGAT TGCTCACACT TACAATCACA TCTATGGACT 
    CTCTCTTACT GGCTTGAGGT TTTTCACCGT CTATGGTCCT TGGGGAAGGC 
    CTGACATGGC CTATTTCTTC TCCCCCCAAA AGACAATCTC AAAGGGAAAG 
    CCATTTCAAT CTTTGAGGGG GTCAACCATG GAACCGTGGC TAGGGACTTC 
    ACTTACATTG ATGACATTGT CAAGGGGTGT TTAGGGGCTT TGGACACGGC 
    TGAGAAGAGC ACTGGTAGTG GTGGTAAGAA GCGCGGAGCG GCTCAGTTAC 
    GGGTTTTCAA TCTCGGCAAC ACTTCGCCCG TTCCAGTGAC TGATCTTGTC 
    ACCATTCTTG AGAGACTTCT CAAAGTCAAG GCCAAGAGGA ACATTATGAA 
    GTTGCCGAGG AACGGGGATG TGCAGTTCAC TCATGCTAAT ATCAGTTCTG 
    CGCAGAGAGA GCTCGGCTAC AAACCACCAC CGATCTTCAG ACGGGTCTCA 
    A

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 39612 [Map]; Strand: w
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17318 - 5-prime edge 
    TCCTACTTTC TCCCTGACAC AACACTCCGC TTCTCTCCAA AAGGGCTTGC 
    CTTGCTCTCT TGAGCGATGG ATCGTAGTAA TCGTTGAAGT TGTCAAGCCC 
    CAGAACGCCA TCTCCGCGGC GTTTGAGAGC GGCGGAGACA TGGGTACCGA 
    CGAAACCGGC GGCTCCGGTG ACGAGAACAG AGAAACCGCG GCGGGTACGG 
    AGACGGGCGG AGGATCTGAC CCGTTTCTCC CAAGCGGGTC CACCCCAGGA 
    GTAGGTACGA AGAGAACGGC GAGAAGGATC GGCGGGATTG GAGGAAACGG 
    GAGATCGGTA GAAGAAGATG AAGATCAAAC CAACGAAGAC GAGAGACCAA 
    AAGGCGAGCT TGGCGACGGA GGATTGCCAC CGCGTACGGT GGAAGTAGGG 
    CTTGAACTTG CCAGGCGTCG AAGGAATATC ATCAAGATGC GACATTTGCT 
    TCATATTTAC CTCTACAGAG AGAATCTTCT TCTTCTTCTT CTTTGAGGTT 
    TCTTTTTTTT CTTGGATTGG TTTTGGTTTT GGTTTGTTTG GTGAGAGCGT 
    TTATAGGCTC TCCGAATAAT AAGGGAAGAT CATCAAATTG AAAAGATTTT 
    TGTTTCTCTA TTTTTGGGCC TTCTTTATTT CTTTTTCT

AT4G00110.1

Model type
Protein coding
Short Description
UDP-D-glucuronate 4-epimerase 3
Curator Summary
Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
Computational Description
UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).
Link
InterPro Scan - TAIR