1. Home
  2. Mutant Lines
  3. GT17320

GT17320

CSHL Arabidopsis genetrap mutant lines

Original: GT17320

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17320

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16380803 [Map]; Strand: w
      • AT4G34215.2 - [+] show detail - Domain of unknown function (DUF303)
        Distance: 0; Region: exon1 (CDS)
      • AT4G34215.1 - [+] show detail - Domain of unknown function (DUF303)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17320 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CCTTTTCATC CCTAGATAAA AGAGTGGGAG 
    CGTGGAAGCC ACTTGTACGA GAGGATGGTC AAGAGAACGG AGGAGAGTAG 
    GAAATGCGGC GGAGAGATCA AGGCGGTGTT GTGGTATCAA GGAGAGAGTG 
    ACGTGTTGGA CATCCATGAC GCCGAGAGCT ACGGGAACAA TATGGATCGT 
    TTGATTAACA ACCTCCGTCA TGATCTCAAC CTTCCTTCTC TTCCCATTAT 
    TCATCTCACT CG

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16380869 [Map]; Strand: w
      • AT4G34215.2 - [+] show detail - Domain of unknown function (DUF303)
        Distance: 0; Region: exon1 (CDS)
      • AT4G34215.1 - [+] show detail - Domain of unknown function (DUF303)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17320 - 5-prime edge 
    TCCTACTTTC TCCCTGCTTT TATCGCCGTT CCACCGGAAG CGCACGGCAC 
    CAACCCGATC ACAGCCGAAT CTGTTTCCAG GCGATTCTTC ACCGCGTTAG 
    CGAACGCCAT TCCTGGACCT ACTCCACACA CTTTACCTGT GTCAATGTCA 
    ACGTGTAGTG GCTCGTGTGC TTCTTCCCAC CGGAGATCTG CGGACAGGCG 
    GAGGATCGAT GAGTTTGGTG CGCATTCCGG TGGGAGGATT TTATCCCACA 
    CCCAGCGATT GTTGTGGTGG TCTTTGAAGA CGCCGCCGCG TCCTGCCATA 
    TTGCTTTGTC CAGAGAGTAT GAAGATCTGA TTTGGTGGAA TTGGAGATTG 
    GATCTCCGGT TTATCTTCAC CGGGAGTGAT AGATCCTCCT TCCATAATTT 
    GGTATCTCTT TGGTAGAGTG ATGATATCAG AATACACTAT CGTGTGATCA 
    GACCATAGAA ATAAGCTATC GAGATGTCTT GTCTGAATAG AAAGTAAAGT 
    TTGGTGGGGT GAGCATCAGA GTTGATCGGA GAAGATGATG TTGAGGCGTG 
    GACACTAGAA TCTTGGTCCG GTTTGGGTCG GTCTGTTTAA AAGTTTGGTT 
    AGGAAGTTAG ACCGAGTTAA TTTTAAGTGA TTCCCGTTGT GTTGGTTTAA 
    TTGGCTTCAT CGGTTAAGAT TCTAATTTTT ATATAGCTTT TTGGTT

AT4G34215.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF303)
Curator Summary
Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.
Computational Description
Domain of unknown function (DUF303) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT3G53010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G34215.2

Model type
Protein coding
Short Description
Domain of unknown function (DUF303)
Curator Summary
Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.
Computational Description
Domain of unknown function (DUF303) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT3G53010.1); Has 345 Blast hits to 345 proteins in 104 species: Archae - 2; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Link
InterPro Scan - TAIR