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GT17339

CSHL Arabidopsis genetrap mutant lines

Original: GT17339

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17339

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9641387 [Map]; Strand: c
      • AT1G27700.1 - [+] show detail - Syntaxin/t-SNARE family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT17339 - 3-prime edge 
    GTAGAGGTAT GTTACCGACC GGAACCGATC GGTTTAATCC TTAGACCCGA 
    CAAATGCGTG AAGATCTCTA TGAAGCTGCT CAGAGTCAGA TACTTTTGAA 
    GAGTCTCGTT TCCCATTGAG CCATGTCCTG TACGCTGACT CCATCCTACA 
    CATGAATCGA AGATAACAAC ACACATTGTG AGATTTCAGA TCTAAGACTT 
    GATTTGATTA ATCAGAAATC GTAATCCCAA ATCCGAAGCA ACACGAATCG 
    AATCGTCGAC ATTGCATCAC CAACAATGAG AGTTTATGGT ATCACAGATT 
    CAAAACGAAA ATTGGGAGAT GAGGATCCGA AAAACGCAAA CCTGTCGGCA 
    GATTCCTGAA CTTCTTCAGC AGCGGGAAAG AAAGGATCTT TCTCCCACCG 
    ATCCAAACTC GACGTCATCA CTTGAGCAGA TGAAAAAAAA CAAACTAATT 
    TCCTAATCCC TTGGAAGATG ACAAGAAACC C

AT1G27700.1

Model type
Protein coding
Short Description
Syntaxin/t-SNARE family protein
Computational Description
Syntaxin/t-SNARE family protein; INVOLVED IN: Golgi vesicle transport, vesicle-mediated transport; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: t-SNARE (InterPro:IPR010989), Syntaxin 6, N-terminal (InterPro:IPR015260); BEST Arabidopsis thaliana protein match is: Syntaxin/t-SNARE family protein (TAIR:AT4G30240.1); Has 134 Blast hits to 133 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR